SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0001679
Gene Symbol: GLCCI1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.8071078C>T COSM3640852 TCGA-EE-A2MS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-3p ccggaatCCCAGGAt CUCCUGGG m7b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-3690 ccggaatTCCAGGat ACCUGGAC m6b Created HHFKP_134007_uc003srk.1_16_24
hsa-miR-4254 ccggaatTCCAGGat GCCUGGAG m6b Created HHFKP_134007_uc003srk.1_16_24
hsa-miR-4320 ccgGAATCCCaggat GGGAUUCU m7a Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-5089-5p ccggAATCCCAggat GUGGGAUU m7b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-6128 ccggaATTCCAGgat ACUGGAAU m7b Created HHFKP_134007_uc003srk.1_16_24
hsa-miR-619-5p ccggaATCCCAGgat GCUGGGAU m7b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-6506-5p ccggaATCCCAGgat ACUGGGAU m7b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-6742-3p ccggaatCCCAGGat ACCUGGGU m6b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-6783-3p ccggaatCCCAGGAt UUCCUGGG m7b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-6852-5p ccggaatCCCAGGat CCCUGGGG m6b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-875-3p ccggaaTTCCAGGat CCUGGAAA m7a Created HHFKP_134007_uc003srk.1_16_24
hsa-miR-939-3p ccggaatCCCAGGat CCCUGGGC m6b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-1343-3p ccggaatCCCAGGAt CUCCUGGG m7b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-3690 ccggaatTCCAGGat ACCUGGAC m6b Created HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-4254 ccggaatTCCAGGat GCCUGGAG m6b Created HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-4320 ccgGAATCCCaggat GGGAUUCU m7a Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-5089-5p ccggAATCCCAggat GUGGGAUU m7b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-6128 ccggaATTCCAGgat ACUGGAAU m7b Created HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-619-5p ccggaATCCCAGgat GCUGGGAU m7b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-6506-5p ccggaATCCCAGgat ACUGGGAU m7b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-6742-3p ccggaatCCCAGGat ACCUGGGU m6b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-6783-3p ccggaatCCCAGGAt UUCCUGGG m7b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-6852-5p ccggaatCCCAGGat CCCUGGGG m6b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-875-3p ccggaaTTCCAGGat CCUGGAAA m7a Created HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-939-3p ccggaatCCCAGGat CCCUGGGC m6b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463

Mutation Mutation ID Sample Name Cancer Type
chr7:g.8071069C>T COSM4459183 CSCC-18-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4497 ttttgtcTCCCGGAa CUCCGGGA m7b Created HHFKP_134007_uc003srk.1_16_24
hsa-miR-6746-5p ttttgTCTCCCGGaa CCGGGAGA m8a Created HHFKP_134007_uc003srk.1_16_24
hsa-miR-6784-5p ttttgtcCCCCGGaa GCCGGGGC m6b Disrupted HHFKP_134007_uc003srk.1_16_24
hsa-miR-4497 ttttgtcTCCCGGAa CUCCGGGA m7b Created HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-6746-5p ttttgTCTCCCGGaa CCGGGAGA m8a Created HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463
hsa-miR-6784-5p ttttgtcCCCCGGaa GCCGGGGC m6b Disrupted HHKTA_46795_NM_138426|1667|1706|1.5143779368115|0.164292505854463

Mutation Mutation ID Sample Name Cancer Type
chr7:g.8071020C>T COSM123370 HN_62854 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-191-3p ccaggAGCGCAGCag GCUGCGCU m8a Disrupted HHFCT_145662_uc003srk.1_9_28
hsa-miR-3130-3p ccaggaGTGCAGCag GCUGCACC m7a Created HHFCT_145662_uc003srk.1_9_28
hsa-miR-4793-3p ccaggAGTGCAGcag UCUGCACU m7b Created HHFCT_145662_uc003srk.1_9_28
hsa-miR-483-3p ccAGGAGTGcagcag UCACUCCU m7b (m6b->m7b) HHFCT_145662_uc003srk.1_9_28
hsa-miR-7703 ccagGAGTGCAgcag UUGCACUC m7b Created HHFCT_145662_uc003srk.1_9_28

Mutation Mutation ID Sample Name Cancer Type
chr7:g.8070078C>T COSN1354152 HX5T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3129-5p aagagtCTACTGCag GCAGUAGU m7a Created HHRBC_11772_BC3-2of3-SCL_5931
hsa-miR-411-5p aagaGTCTACTgcag UAGUAGAC m7b Created HHRBC_11772_BC3-2of3-SCL_5931
hsa-miR-5693 aagagtCCACTGCag GCAGUGGC m7a Disrupted HHRBC_11772_BC3-2of3-SCL_5931
hsa-miR-6499-3p aagagtcCACTGCag AGCAGUGU m6b Disrupted HHRBC_11772_BC3-2of3-SCL_5931
hsa-miR-936 aagagTCTACTGcag ACAGUAGA m7b Created HHRBC_11772_BC3-2of3-SCL_5931

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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