SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001079811
Gene Symbol: GLB1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.32997333G>T COSM1645628 TCGA-C4-A0F1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-655-3p aggtcTGTATTAatg AUAAUACA m7b Created HPSEF_15666_G18876.1_33038819
hsa-miR-374c-5p aggtcTGTATTAatg AUAAUACA m7b Created HPSEF_15666_G18876.1_33038819
hsa-miR-655-3p aggtcTGTATTAatg AUAAUACA m7b Created HPSEF_15666_G18876.1_33038819
hsa-miR-374c-5p aggtcTGTATTAatg AUAAUACA m7b Created HPSEF_15666_G18876.1_33038819

Mutation Mutation ID Sample Name Cancer Type
chr3:g.32997317C>A COSM1043689 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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