SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000819
Gene Symbol: GART
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517410C>A COSM1030310 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-9500 gcaaaatCTTCCCTc AAGGGAAG m7b Disrupted HPTA3_12421_G19656.1_34889717
hsa-miR-4699-5p gcaaAATCTTCcctc AGAAGAUU m7b Disrupted HPTA3_12421_G19656.1_34889717

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517407C>T COSM1721978 2_PRE-TREATMENT [NS][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6797-5p aaatctTCCCTCCag AGGAGGGA m7b Disrupted HPTA3_12421_G19656.1_34889717
hsa-miR-6894-5p aaatcttTCCTCCag AGGAGGAU m6b Created HPTA3_12421_G19656.1_34889717
hsa-miR-7154-3p aaatcttTCCTCCag AGGAGGAC m6b Created HPTA3_12421_G19656.1_34889717
hsa-miR-766-5p aaatctTTCCTCCag AGGAGGAA m7b Created HPTA3_12421_G19656.1_34889717
hsa-miR-9500 aaatCTTCCCTccag AAGGGAAG m7b Disrupted HPTA3_12421_G19656.1_34889717
hsa-miR-3928-3p aaatctTTCCTCCag GGAGGAAC m7a Created HPTA3_12421_G19656.1_34889717
hsa-miR-6515-5p aaatcttCCCTCCAg UUGGAGGG m7b Disrupted HPTA3_12421_G19656.1_34889717
hsa-miR-1249-5p aaatctTCCCTCCag AGGAGGGA m7b Disrupted HPTA3_12421_G19656.1_34889717

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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