SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000156
Gene Symbol: GAMT
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.1399843G>T COSM4619106 C32 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-616-3p gtgCAATGACggcgt AGUCAUUG m7b Disrupted HHFCT_74159_cluster-11927_1_8
hsa-miR-616-3p gtgCAATGACggcgt AGUCAUUG m7b Disrupted HHFCT_74159_cluster-11927_1_8

Mutation Mutation ID Sample Name Cancer Type
chr19:g.1399837G>A COSM991760 HCC4T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7-5p tgacggcGTCTTCCa UGGAAGAC m7b Disrupted HHFCT_74159_cluster-11927_1_8
hsa-miR-7-5p tgacggcGTCTTCCa UGGAAGAC m7b Disrupted HHFCT_74159_cluster-11927_1_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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