SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000147
Gene Symbol: FUCA1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.23845849A>T COSM1340709 TCGA-G4-6323-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4310 gataacAATGCTGgg GCAGCAUU m7b Disrupted HPTA3_1372_G2122.1_24172339
hsa-miR-338-3p gataacaATGCTGGg UCCAGCAU m7b Disrupted HPTA3_1372_G2122.1_24172339
hsa-miR-3908 gataaCATTGCTggg GAGCAAUG m7b Created HPTA3_1372_G2122.1_24172339
hsa-miR-7157-5p gataacAATGCTGgg UCAGCAUU m7b Disrupted HPTA3_1372_G2122.1_24172339

Mutation Mutation ID Sample Name Cancer Type
chr1:g.23845841A>G COSM2049944 LS411 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p tgctgggAATTCAag GUGAAUUA m6b Disrupted HPTA3_1372_G2122.1_24172339
hsa-miR-2355-5p tgCTGGGGATtcaag AUCCCCAG m8a Created HPTA3_1372_G2122.1_24172339
hsa-miR-4452 tgctggGAATTCAAg UUGAAUUC m8a Disrupted HPTA3_1372_G2122.1_24172339
hsa-miR-7977 tGCTGGGAAttcaag UUCCCAGC m8a (m8a->m7a) HPTA3_1372_G2122.1_24172339

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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