SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000143
Gene Symbol: FH
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.241502551G>T COSM3369635 TCGA-EL-A3T1-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216b-3p ctactcAGTGTGaag ACACACUU m6b Disrupted HPRO6_9622_G11064.1_241665852
hsa-miR-377-3p ctactcaGTGTGAag AUCACACA m6b Disrupted HPRO6_9622_G11064.1_241665852

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241502547G>T COSM533676 TCGA-50-5045-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-3p tCAGTGTTAagcaat UAACACUG m8a (m7a->m8a) HPRO6_9622_G11064.1_241665852
hsa-miR-200a-3p tCAGTGTTAagcaat UAACACUG m8a (m7a->m8a) HPRO6_9622_G11064.1_241665852
hsa-miR-216b-3p tcAGTGTGaagcaat ACACACUU m6b Disrupted HPRO6_9622_G11064.1_241665852
hsa-miR-377-3p tcaGTGTGAagcaat AUCACACA m6b Disrupted HPRO6_9622_G11064.1_241665852
hsa-miR-3977 tcagtgTGAAGCAat GUGCUUCA m7b Disrupted HPRO6_9622_G11064.1_241665852
hsa-miR-4720-3p tcagtgTTAAGCAat UGCUUAAG m7a Created HPRO6_9622_G11064.1_241665852
hsa-miR-4804-3p tcagtGTTAAGCAat UGCUUAAC m8a Created HPRO6_9622_G11064.1_241665852
hsa-miR-6757-3p tCAGTGTTaagcaat AACACUGG m7a Created HPRO6_9622_G11064.1_241665852

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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