SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0017598
Gene Symbol: FBXO18
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.5917488G>A COSM179350 TCGA-AA-A00J-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-3p aagAGGCACaccaga AGUGCCUG m6b Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-2682-3p AAGAGGCGcaccaga CGCCUCUU m8a Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-3650 aagaggCACACCaga AGGUGUGU m6b Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-4466 aagaggCGCACCaga GGGUGCGG m6b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-548q aagaggcGCACCAGa GCUGGUGC m7b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-550a-3-5p aagAGGCACaccaga AGUGCCUG m6b Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-550a-5p aagAGGCACaccaga AGUGCCUG m6b Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-550b-2-5p aagAGGCACAccaga AUGUGCCU m7b Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-668-5p aaGAGGCGCAccaga UGCGCCUC m8a Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-6720-3p aagAGGCGCaccaga CGCGCCUG m6b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-6781-3p AAGAGGCAcaccaga UGCCUCUU m8a Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-7978 aagaggcACACCAGa UCUGGUGU m7b Created HHRBL_1836_BCBL1-2of3-SCL_10784

Mutation Mutation ID Sample Name Cancer Type
chr10:g.5917487C>T COSM4014836 TCGA-HU-A4GU-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2682-3p gAAGAGGCGcaccag CGCCUCUU m8a (m8a->m7a) HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-4466 gaagaggCGCACCag GGGUGCGG m6b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-500a-3p gaagAGGTGCAccag AUGCACCU m7b Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-668-5p gaaGAGGCGCAccag UGCGCCUC m8a Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-6720-3p gaagAGGCGCaccag CGCGCCUG m6b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-6781-3p gAAGAGGCgcaccag UGCCUCUU m7b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-6804-3p gaagAGGTGCaccag CGCACCUG m6b Created HHRBL_1836_BCBL1-2of3-SCL_10784

Mutation Mutation ID Sample Name Cancer Type
chr10:g.5917483G>A COSM684839 TCGA-46-3765-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2682-3p cacagAAGAGGCGca CGCCUCUU m8a Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-4743-3p cACAGAAAaggcgca UUUCUGUC m7a Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-627-3p cacAGAAAAGgcgca UCUUUUCU m7b Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-668-5p cacagaaGAGGCGCa UGCGCCUC m7b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-6781-3p cacagAAGAGGCgca UGCCUCUU m7b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-877-3p cacaGAAGAGGcgca UCCUCUUC m7b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784

Mutation Mutation ID Sample Name Cancer Type
chr10:g.5917480G>C COSM1297332 TCGA-DK-A2I1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-147a gtgCACACAagaggc GUGUGUGG m6b Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-3182 gtgcACAGAAGaggc GCUUCUGU m7b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-5008-3p gtGCACAGaagaggc CCUGUGCU m6b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-581 gtgcACACAAGAggc UCUUGUGU m8a Created HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-6737-3p gtGCACAGAagaggc UCUGUGCU m7a (m7a->m6a) HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-6889-3p gtGCACAGAagaggc UCUGUGCC m7a (m7a->m6a) HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-7157-3p gtGCACAGAagaggc UCUGUGCU m7a (m7a->m6a) HHRBL_1836_BCBL1-2of3-SCL_10784
hsa-miR-877-3p gtgcacaGAAGAGGc UCCUCUUC m7b Disrupted HHRBL_1836_BCBL1-2of3-SCL_10784

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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