SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0059084
Gene Symbol: FARP2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.241431719G>A COSM3727296 WM3211 [skin][ankle][malignant_melanoma][acral_lentiginous]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4535 aAGGTCCAtaaacta GUGGACCU m7b Created HHFKP_86584_cluster-13478_4_44
hsa-miR-4788 aagGTCCGTAAacta UUACGGAC m8a Disrupted HHFKP_86584_cluster-13478_4_44

Mutation Mutation ID Sample Name Cancer Type
chr2:g.241431681C>T COSM2910586 SNU-C2B [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1263 ttcagGGTACCAcca AUGGUACC m7b Created HPSLC_10931_G12931.1_242371102
hsa-miR-874-3p ttCAGGGCAccacca CUGCCCUG m7b (m7b->m6b) HPCB3_12879_G17539.1_242371100
hsa-miR-7976 tTCAGGGCAccacca UGCCCUGA m8a (m8a->m7a) HPCB3_12879_G17539.1_242371100
hsa-miR-345-3p TTCAGGGCaccacca GCCCUGAA m8a Disrupted HPSLC_10931_G12931.1_242371102
hsa-miR-7976 tTCAGGGCAccacca UGCCCUGA m8a (m8a->m7a) HPSLC_10931_G12931.1_242371102
hsa-miR-874-3p ttCAGGGCAccacca CUGCCCUG m7b (m7b->m6b) HPSLC_10931_G12931.1_242371102
hsa-miR-7976 tTCAGGGCAccacca UGCCCUGA m8a (m8a->m7a) HPCB1_22702_G28708.1_242371101
hsa-miR-345-3p TTCAGGGCaccacca GCCCUGAA m8a Disrupted HPCB1_22702_G28708.1_242371101
hsa-miR-1263 ttcagGGTACCAcca AUGGUACC m7b Created HPCB1_22702_G28708.1_242371101
hsa-miR-345-3p TTCAGGGCaccacca GCCCUGAA m8a Disrupted HPCB3_12879_G17539.1_242371100
hsa-miR-1263 ttcagGGTACCAcca AUGGUACC m7b Created HPCB3_12879_G17539.1_242371100
hsa-miR-874-3p ttCAGGGCAccacca CUGCCCUG m7b (m7b->m6b) HPCB1_22702_G28708.1_242371101

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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