SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010872
Gene Symbol: FAM83B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.54940668C>T COSM3628674 TCGA-GF-A4EO-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p tcaAATTCAactatc GUGAAUUA m6b Disrupted HHHSE_6267_FAM83B|NM_001010872|exon_CDS|-4.52776244684063|1.09942021979902
hsa-miR-3606-3p tcAAATTTaactatc AAAAUUUC m6b Created HHHSE_6267_FAM83B|NM_001010872|exon_CDS|-4.52776244684063|1.09942021979902
hsa-miR-513a-3p tcAAATTTAactatc UAAAUUUC m7a (m6a->m7a) HHHSE_6267_FAM83B|NM_001010872|exon_CDS|-4.52776244684063|1.09942021979902
hsa-miR-513c-3p tcAAATTTAactatc UAAAUUUC m7a (m6a->m7a) HHHSE_6267_FAM83B|NM_001010872|exon_CDS|-4.52776244684063|1.09942021979902

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser