SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077498
Gene Symbol: FAM222B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.28759708C>T COSM3819160 TCGA-GM-A2DO-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1587 gacacatCAGCCCAg UUGGGCUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-3620-5p gacacatCAGCCCAg GUGGGCUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4492 gacacatCAGCCCag GGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4656 gacacaTCAGCCCAg UGGGCUGA m8a Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4675 gacacatCAGCCCag GGGGCUGU m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4741 gacacatCAGCCCag CGGGCUGU m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-5001-5p gacacatCAGCCCag AGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-511-3p gACACATTagcccag AAUGUGUA m7a Created HPTA2_840_G2358.1_27086724
hsa-miR-664b-5p gacacaTTAGCCCAg UGGGCUAA m8a Created HPTA2_840_G2358.1_27086724
hsa-miR-762 gacacatCAGCCCag GGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-8066 gaCACATTagcccag CAAUGUGA m6b Created HPTA2_840_G2358.1_27086724
hsa-miR-8075 gacaCATCAGCccag UGCUGAUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-1587 gacacatCAGCCCAg UUGGGCUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-3620-5p gacacatCAGCCCAg GUGGGCUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4492 gacacatCAGCCCag GGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4656 gacacaTCAGCCCAg UGGGCUGA m8a Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4675 gacacatCAGCCCag GGGGCUGU m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4741 gacacatCAGCCCag CGGGCUGU m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-5001-5p gacacatCAGCCCag AGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-511-3p gACACATTagcccag AAUGUGUA m7a Created HPTA2_840_G2358.1_27086724
hsa-miR-664b-5p gacacaTTAGCCCAg UGGGCUAA m8a Created HPTA2_840_G2358.1_27086724
hsa-miR-762 gacacatCAGCCCag GGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-8066 gaCACATTagcccag CAAUGUGA m6b Created HPTA2_840_G2358.1_27086724
hsa-miR-8075 gacaCATCAGCccag UGCUGAUG m7b Disrupted HPTA2_840_G2358.1_27086724

Mutation Mutation ID Sample Name Cancer Type
chr17:g.28759708C>G COSM4818289 TCGA-IR-A3LK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1587 gacacatCAGCCCAg UUGGGCUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-3607-5p gaCACATGagcccag GCAUGUGA m6b Created HPTA2_840_G2358.1_27086724
hsa-miR-3620-5p gacacatCAGCCCAg GUGGGCUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4284 gacacaTGAGCCCag GGGCUCAC m7a Created HPTA2_840_G2358.1_27086724
hsa-miR-4437 gacacaTGAGCCCAg UGGGCUCA m8a Created HPTA2_840_G2358.1_27086724
hsa-miR-4492 gacacatCAGCCCag GGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4656 gacacaTCAGCCCAg UGGGCUGA m8a Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4674 gacacatGAGCCCAg CUGGGCUC m7b Created HPTA2_840_G2358.1_27086724
hsa-miR-4675 gacacatCAGCCCag GGGGCUGU m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4741 gacacatCAGCCCag CGGGCUGU m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-5001-5p gacacatCAGCCCag AGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-6847-3p gacaCATGAGCCcag GGCUCAUG m8a Created HPTA2_840_G2358.1_27086724
hsa-miR-762 gacacatCAGCCCag GGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-8075 gacaCATCAGCccag UGCUGAUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-1587 gacacatCAGCCCAg UUGGGCUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-3607-5p gaCACATGagcccag GCAUGUGA m6b Created HPTA2_840_G2358.1_27086724
hsa-miR-3620-5p gacacatCAGCCCAg GUGGGCUG m7b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4284 gacacaTGAGCCCag GGGCUCAC m7a Created HPTA2_840_G2358.1_27086724
hsa-miR-4437 gacacaTGAGCCCAg UGGGCUCA m8a Created HPTA2_840_G2358.1_27086724
hsa-miR-4492 gacacatCAGCCCag GGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4656 gacacaTCAGCCCAg UGGGCUGA m8a Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4674 gacacatGAGCCCAg CUGGGCUC m7b Created HPTA2_840_G2358.1_27086724
hsa-miR-4675 gacacatCAGCCCag GGGGCUGU m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-4741 gacacatCAGCCCag CGGGCUGU m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-5001-5p gacacatCAGCCCag AGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-6847-3p gacaCATGAGCCcag GGCUCAUG m8a Created HPTA2_840_G2358.1_27086724
hsa-miR-762 gacacatCAGCCCag GGGGCUGG m6b Disrupted HPTA2_840_G2358.1_27086724
hsa-miR-8075 gacaCATCAGCccag UGCUGAUG m7b Disrupted HPTA2_840_G2358.1_27086724

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser