SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001998
Gene Symbol: EXOSC10
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.11068062AT>T COSM1332548 T368 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4775 caaaAAAATTAAacag UUAAUUUU m8a Disrupted HHKTA_47736_NM_001001998|2608|2647|1.47110999575974|2.31213084651215
hsa-miR-590-3p caaaAAAATTAaacag UAAUUUUA m7a Disrupted HHKTA_47736_NM_001001998|2608|2647|1.47110999575974|2.31213084651215

Mutation Mutation ID Sample Name Cancer Type
chr1:g.11068053C>T COSM1332547 TCGA-CK-5913-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-452-5p AAACAGTTggtggga AACUGUUU m8a Created HHKTA_47736_NM_001001998|2608|2647|1.47110999575974|2.31213084651215
hsa-miR-6510-3p aaacAGTCGGTGgga CACCGACU m8a Disrupted HHKTA_47736_NM_001001998|2608|2647|1.47110999575974|2.31213084651215

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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