SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001031711
Gene Symbol: ERGIC1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.172951474C>T COSN5073042 HX29T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6862-5p cagATGCCCagttgc CGGGCAUG m6b Disrupted HHRBL_11869_BCBL1-2of3-SCL_11159
hsa-miR-6860 cagaTGCCCAGTtgc ACUGGGCA m8a Disrupted HHRBL_11869_BCBL1-2of3-SCL_11159
hsa-miR-612 cagaTGCCCAGttgc GCUGGGCA m7b Disrupted HHRBL_11869_BCBL1-2of3-SCL_11159
hsa-miR-5189-5p cagaTGCCCAGttgc UCUGGGCA m7b Disrupted HHRBL_11869_BCBL1-2of3-SCL_11159
hsa-miR-4253 cagATGCCCagttgc AGGGCAUG m6b Disrupted HHRBL_11869_BCBL1-2of3-SCL_11159
hsa-miR-3945 cagATGCCCagttgc AGGGCAUA m6b Disrupted HHRBL_11869_BCBL1-2of3-SCL_11159
hsa-miR-3187-5p cagaTGCCCAGttgc CCUGGGCA m7b Disrupted HHRBL_11869_BCBL1-2of3-SCL_11159
hsa-miR-1285-3p cagaTGCCCAGttgc UCUGGGCA m7b Disrupted HHRBL_11869_BCBL1-2of3-SCL_11159

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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