SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0037935
Gene Symbol: ERCC4
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr16:g.13935194G>A COSM1518158 TCGA-95-7039-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-3p cagCTGAAAGactat CUUUCAGU m7a Created HHFCT_58145_cluster-8409_7_8
hsa-miR-30d-3p cagCTGAAAGactat CUUUCAGU m7a Created HHFCT_58145_cluster-8409_7_8
hsa-miR-30e-3p cagCTGAAAGactat CUUUCAGU m7a Created HHFCT_58145_cluster-8409_7_8
hsa-miR-4474-5p cagctgaGAGACTAt UUAGUCUC m7b Disrupted HHFCT_58145_cluster-8409_7_8
hsa-miR-6787-3p cAGCTGAGAgactat UCUCAGCU m8a (m8a->m7a) HHFCT_58145_cluster-8409_7_8
hsa-miR-6830-3p cagctGAAAGACtat UGUCUUUC m7b Created HHFCT_58145_cluster-8409_7_8
hsa-miR-6895-3p cagctGAGAGACtat UGUCUCUC m7b Disrupted HHFCT_58145_cluster-8409_7_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.13935192G>A COSM3402079 TCGA-76-6656-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p cCCAGCTGAgagact UCAGCUGG m8a (m8a->m7a) HHFCT_58145_cluster-8409_7_8
hsa-miR-6787-3p cccAGCTGAGAgact UCUCAGCU m8a Disrupted HHFCT_58145_cluster-8409_7_8
hsa-miR-6895-3p cccagctGAGAGACt UGUCUCUC m7b Disrupted HHFCT_58145_cluster-8409_7_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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