SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_110535
Gene Symbol: ERBB2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.39728008G>T COSM978682 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2117 cggcAGAGAACccag UGUUCUCU m7b Disrupted HHFCT_67198_cluster-9582_14_8
hsa-miR-23a-5p cggcagaGAACCCag GGGGUUCC m6b Disrupted HHFCT_67198_cluster-9582_14_8
hsa-miR-3191-5p cggCAGAGAacccag CUCUCUGG m6b Disrupted HHFCT_67198_cluster-9582_14_8
hsa-miR-4686 cgGCAGATAacccag UAUCUGCU m7a (m6a->m7a) HHFCT_67198_cluster-9582_14_8
hsa-miR-4727-5p cGGCAGATaacccag AUCUGCCA m7a Created HHFCT_67198_cluster-9582_14_8
hsa-miR-597-3p cggcaGAGAACCcag UGGUUCUC m7b Disrupted HHFCT_67198_cluster-9582_14_8
hsa-miR-6728-3p cgGCAGAGAacccag UCUCUGCU m7a (m7a->m6a) HHFCT_67198_cluster-9582_14_8

Mutation Mutation ID Sample Name Cancer Type
chr17:g.39728006G>C COSM417559 TCGA-BT-A0YX-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-152-5p tacggcaCAGAACCc AGGUUCUG m7b Created HHFCT_67198_cluster-9582_14_8
hsa-miR-2117 tacggcAGAGAACcc UGUUCUCU m7b Disrupted HHFCT_67198_cluster-9582_14_8
hsa-miR-3191-5p tacggCAGAGAaccc CUCUCUGG m6b Disrupted HHFCT_67198_cluster-9582_14_8
hsa-miR-5008-3p tacgGCACAGaaccc CCUGUGCU m6b Created HHFCT_67198_cluster-9582_14_8
hsa-miR-597-3p tacggcaGAGAACCc UGGUUCUC m7b Disrupted HHFCT_67198_cluster-9582_14_8
hsa-miR-6728-3p tacgGCAGAGAaccc UCUCUGCU m7a Disrupted HHFCT_67198_cluster-9582_14_8
hsa-miR-6737-3p tacgGCACAGAaccc UCUGUGCU m7a Created HHFCT_67198_cluster-9582_14_8
hsa-miR-6889-3p tacGGCACAGAaccc UCUGUGCC m8a Created HHFCT_67198_cluster-9582_14_8
hsa-miR-7157-3p tacgGCACAGAaccc UCUGUGCU m7a Created HHFCT_67198_cluster-9582_14_8
Mutation Mutation ID Sample Name Cancer Type
chr17:g.39727964C>CG COSM4681503 T3535 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr17:g.39727955C>T COSM1382880 TCGA-CM-6162-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4299 ccaggacTCACCAGa GCUGGUGA m7b Created HHFKP_63455_cluster-9582_13_18
hsa-miR-4456 ccaggacCCACCAGa CCUGGUGG m7b Disrupted HHFKP_63455_cluster-9582_13_18
hsa-miR-4710 ccaggaCTCACCaga GGGUGAGG m6b Created HHFKP_63455_cluster-9582_13_18
hsa-miR-4792 ccaggaCTCACCaga CGGUGAGC m6b Created HHFKP_63455_cluster-9582_13_18
hsa-miR-6769a-5p ccaggACCCACCaga AGGUGGGU m7b Disrupted HHFKP_63455_cluster-9582_13_18
hsa-miR-6769b-5p ccaggACCCACCAga UGGUGGGU m8a Disrupted HHFKP_63455_cluster-9582_13_18
hsa-miR-6838-3p cCAGGACTcaccaga AAGUCCUG m7b Created HHFKP_63455_cluster-9582_13_18
hsa-miR-7855-5p ccaggaCTCACCAga UUGGUGAG m7b Created HHFKP_63455_cluster-9582_13_18
hsa-miR-92a-2-5p ccaggaCCCACCaga GGGUGGGG m6b Disrupted HHFKP_63455_cluster-9582_13_18

Mutation Mutation ID Sample Name Cancer Type
chr17:g.39727932A>G COSM186272 TCGA-AA-3947-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3188 ttcgacAGCCTCTat AGAGGCUU m7a Created HPRO6_32260_G38258.1_37884195
hsa-miR-323b-5p ttcGACAACCTctat AGGUUGUC m8a Disrupted HPRO6_32260_G38258.1_37884195
hsa-miR-377-5p ttcgaCAACCTCTat AGAGGUUG m8a Disrupted HPRO6_32260_G38258.1_37884195
hsa-miR-410-5p ttcGACAACCTctat AGGUUGUC m8a Disrupted HPRO6_32260_G38258.1_37884195
hsa-miR-485-5p ttcgaCAGCCTCTat AGAGGCUG m8a Created HPRO6_32260_G38258.1_37884195
hsa-miR-494-5p ttcGACAACCTctat AGGUUGUC m8a Disrupted HPRO6_32260_G38258.1_37884195
hsa-miR-6086 ttcgaCAACCTCtat GGAGGUUG m7b Disrupted HPRO6_32260_G38258.1_37884195
hsa-miR-655-5p ttcgacAACCTCTat AGAGGUUA m7a Disrupted HPRO6_32260_G38258.1_37884195
hsa-miR-6866-5p ttcgacaGCCTCTAt UUAGAGGC m7b Created HPRO6_32260_G38258.1_37884195
hsa-miR-6884-5p ttcgaCAGCCTCTat AGAGGCUG m8a Created HPRO6_32260_G38258.1_37884195

Mutation Mutation ID Sample Name Cancer Type
chr17:g.39727733C>T COSM1659147 9 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1266-5p ttcgCCCTGAGaggg CCUCAGGG m7b Created HHFCT_67197_cluster-9582_13_9
hsa-miR-3127-5p ttcGCCCTGAgaggg AUCAGGGC m7b Created HHFCT_67197_cluster-9582_13_9
hsa-miR-3196 ttCGCCCCGagaggg CGGGGCGG m7a (m7a->m6a) HHFCT_67197_cluster-9582_13_9
hsa-miR-3615 ttcgccCCGAGAGgg UCUCUCGG m7b Disrupted HHFCT_67197_cluster-9582_13_9
hsa-miR-3918 ttcGCCCTGagaggg ACAGGGCC m6b Created HHFCT_67197_cluster-9582_13_9
hsa-miR-4508 ttcGCCCCGagaggg GCGGGGCU m6b Disrupted HHFCT_67197_cluster-9582_13_9
hsa-miR-4518 ttcgCCCTGAGaggg GCUCAGGG m7b Created HHFCT_67197_cluster-9582_13_9
hsa-miR-5090 ttcGCCCCGagaggg CCGGGGCA m6b Disrupted HHFCT_67197_cluster-9582_13_9
hsa-miR-6727-5p ttcGCCCCGAGaggg CUCGGGGC m8a Disrupted HHFCT_67197_cluster-9582_13_9

Mutation Mutation ID Sample Name Cancer Type
chr17:g.39727729G>A COSM4681502 T55 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3196 ccccttCGCCCCGag CGGGGCGG m7a Disrupted HHFCT_67197_cluster-9582_13_9
hsa-miR-4508 ccccttcGCCCCGag GCGGGGCU m6b Disrupted HHFCT_67197_cluster-9582_13_9
hsa-miR-4651 ccccttCACCCCGag CGGGGUGG m7a Created HHFCT_67197_cluster-9582_13_9
hsa-miR-5090 ccccttcGCCCCGag CCGGGGCA m6b Disrupted HHFCT_67197_cluster-9582_13_9
hsa-miR-6727-5p ccccttcGCCCCGAg CUCGGGGC m7b Disrupted HHFCT_67197_cluster-9582_13_9
hsa-miR-6864-5p cCCCTTCAccccgag UUGAAGGG m7b Created HHFCT_67197_cluster-9582_13_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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