SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0054590
Gene Symbol: EML6
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.54866786T>C COSM3962940 J90_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-let-7b-5p atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-let-7c-5p atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-let-7d-5p atCTACCTCagctaa AGAGGUAG m7b (m7b->m6b) HHFKP_81640_cluster-12881_9_8
hsa-let-7e-5p atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-let-7f-5p atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-let-7g-5p atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-let-7i-5p atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-miR-202-3p atcTACCTCagctaa AGAGGUAU m6b Disrupted HHFKP_81640_cluster-12881_9_8
hsa-miR-3132 aTCTACCCcagctaa UGGGUAGA m7b Created HHFKP_81640_cluster-12881_9_8
hsa-miR-3927-3p aTCTACCTcagctaa CAGGUAGA m7b Disrupted HHFKP_81640_cluster-12881_9_8
hsa-miR-4458 atCTACCTCagctaa AGAGGUAG m7b (m7b->m6b) HHFKP_81640_cluster-12881_9_8
hsa-miR-4500 atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-miR-4663 atctacCTCAGCTaa AGCUGAGC m7a Disrupted HHFKP_81640_cluster-12881_9_8
hsa-miR-4731-5p atctaCCCCAGCtaa UGCUGGGG m7b Created HHFKP_81640_cluster-12881_9_8
hsa-miR-6831-5p aTCTACCTcagctaa UAGGUAGA m7b Disrupted HHFKP_81640_cluster-12881_9_8
hsa-miR-7155-5p atctACCCCAGctaa UCUGGGGU m7b Created HHFKP_81640_cluster-12881_9_8
hsa-miR-7160-5p atctaCCTCAGCtaa UGCUGAGG m7b Disrupted HHFKP_81640_cluster-12881_9_8
hsa-miR-7162-3p atctACCTCAGctaa UCUGAGGU m7b Disrupted HHFKP_81640_cluster-12881_9_8
hsa-miR-98-5p atCTACCTCAgctaa UGAGGUAG m8a Disrupted HHFKP_81640_cluster-12881_9_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.54847565G>A COSM4755587 pfg064T [stomach][NS][carcinoma][diffuse_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p caGCCCCAacggatc GUGGGGCC m6b Created HHFCT_88418_cluster-12881_6_6
hsa-miR-4260 caGCCCCAAcggatc CUUGGGGC m7b (m6b->m7b) HHFCT_88418_cluster-12881_6_6
hsa-miR-4283 cAGCCCCAacggatc UGGGGCUC m7a Created HHFCT_88418_cluster-12881_6_6
hsa-miR-4489 cAGCCCCAacggatc UGGGGCUA m7a Created HHFCT_88418_cluster-12881_6_6
hsa-miR-4800-3p cagccccGACGGATc CAUCCGUC m7b Disrupted HHFCT_88418_cluster-12881_6_6
hsa-miR-5090 caGCCCCGacggatc CCGGGGCA m6b Disrupted HHFCT_88418_cluster-12881_6_6
hsa-miR-6727-5p caGCCCCGAcggatc CUCGGGGC m7b (m7b->m6b) HHFCT_88418_cluster-12881_6_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.54847544C>T COSM1408586 TCGA-CK-5913-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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