SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_004746
Gene Symbol: DLGAP1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.4405234A>T COSN5427623 RK134_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-331-5p gATACCTAtggcatt CUAGGUAU m7b Disrupted HPSLC_9217_G10890.1_4405233
hsa-miR-5590-5p gataccTATGGCAtt UUGCCAUA m7b Disrupted HPSLC_9217_G10890.1_4405233
hsa-miR-548m gaTACCTTTGgcatt CAAAGGUA m8a Created HPSLC_9217_G10890.1_4405233

Mutation Mutation ID Sample Name Cancer Type
chr18:g.4405226A>T COSN9839194 C0010T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-496 tggcattAATACTCc UGAGUAUU m7b Disrupted HPSLC_9217_G10890.1_4405233
hsa-miR-365b-3p tGGCATTAatactcc UAAUGCCC m7a Disrupted HPSLC_9217_G10890.1_4405233
hsa-miR-365a-3p tGGCATTAatactcc UAAUGCCC m7a Disrupted HPSLC_9217_G10890.1_4405233

Mutation Mutation ID Sample Name Cancer Type
chr18:g.3741307G>C COSN15655378
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1288-5p tggTGATCTGatgtg GCAGAUCA m7b Created HHFCT_70089_cluster-10913_2_6
hsa-miR-499a-3p tggtgatGTGATGTg AACAUCAC m7b Disrupted HHFCT_70089_cluster-10913_2_6
hsa-miR-499b-3p tggtgatGTGATGTg AACAUCAC m7b Disrupted HHFCT_70089_cluster-10913_2_6
hsa-miR-5100 tggtGATCTGAtgtg UUCAGAUC m7b Created HHFCT_70089_cluster-10913_2_6
hsa-miR-5694 tggTGATCTGatgtg CAGAUCAU m7a Created HHFCT_70089_cluster-10913_2_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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