SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001101654
Gene Symbol: CXXC1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.50287465G>A COSN8314422 TCGA-A7-A3J0-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1976 gaacgGCAGGAGtct CCUCCUGC m7b Created HHFKP_66622_cluster-11038_8_55
hsa-miR-4258 gaacGGCGGGagtct CCCCGCCA m6b Disrupted HHFKP_66622_cluster-11038_8_55
hsa-miR-4722-3p gaacGGCAGGagtct ACCUGCCA m6b Created HHFKP_66622_cluster-11038_8_55
hsa-miR-7108-3p gaacGGCGGGagtct ACCCGCCC m6b Disrupted HHFKP_66622_cluster-11038_8_55

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286822G>A COSM4072480 TCGA-IN-8663-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-221-5p agaTGCCAGGgagga ACCUGGCA m7b Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4292 agatgCCAGGGagga CCCCUGGG m6b Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4642 aGATGCCAgggagga AUGGCAUC m7b Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4707-5p agatGCCGGGGagga GCCCCGGC m7b Disrupted HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4720-5p agATGCCAGGgagga CCUGGCAU m8a Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4799-3p agATGCCAGggagga ACUGGCAU m7b (m6b->m7b) HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-5587-3p agatgCCGGGGagga GCCCCGGG m6b Disrupted HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-5588-5p agATGCCAGggagga ACUGGCAU m7b (m6b->m7b) HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-6763-3p agatgCCGGGGAGga CUCCCCGG m8a Disrupted HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-6791-5p agatgCCAGGGagga CCCCUGGG m6b Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-7113-3p agatgcCAGGGAGGa CCUCCCUG m8a Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-8073 agaTGCCAGGgagga ACCUGGCA m7b Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-221-5p agaTGCCAGGgagga ACCUGGCA m7b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4292 agatgCCAGGGagga CCCCUGGG m6b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4642 aGATGCCAgggagga AUGGCAUC m7b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4707-5p agatGCCGGGGagga GCCCCGGC m7b Disrupted HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4720-5p agATGCCAGGgagga CCUGGCAU m8a Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-4799-3p agATGCCAGggagga ACUGGCAU m7b (m6b->m7b) HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-5587-3p agatgCCGGGGagga GCCCCGGG m6b Disrupted HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-5588-5p agATGCCAGggagga ACUGGCAU m7b (m6b->m7b) HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-6763-3p agatgCCGGGGAGga CUCCCCGG m8a Disrupted HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-6791-5p agatgCCAGGGagga CCCCUGGG m6b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-7113-3p agatgcCAGGGAGGa CCUCCCUG m8a Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-8073 agaTGCCAGGgagga ACCUGGCA m7b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286780T>C COSM3526244 TCGA-FS-A1ZK-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3129-5p gcccatCTACTGCat GCAGUAGU m7a Disrupted HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-3681-5p gcccATCCACTgcat UAGUGGAU m7b Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-3691-5p gccCATCCACTgcat AGUGGAUG m8a Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-432-3p gcCCATCCActgcat CUGGAUGG m7b (m6b->m7b) HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-5693 gcccatCCACTGCat GCAGUGGC m7a Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-6499-3p gcccatcCACTGCat AGCAGUGU m6b Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-6849-5p gcccATCCACTgcat GAGUGGAU m7b Created HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-936 gcccaTCTACTGcat ACAGUAGA m7b Disrupted HHHNA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-1193 gcCCATCCactgcat GGGAUGGU m6b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-3129-5p gcccatCTACTGCat GCAGUAGU m7a Disrupted HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-3681-5p gcccATCCACTgcat UAGUGGAU m7b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-3691-5p gccCATCCACTgcat AGUGGAUG m8a Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-432-3p gcCCATCCActgcat CUGGAUGG m7b (m6b->m7b) HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-5693 gcccatCCACTGCat GCAGUGGC m7a Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-6499-3p gcccatcCACTGCat AGCAGUGU m6b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-6849-5p gcccATCCACTgcat GAGUGGAU m7b Created HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357
hsa-miR-936 gcccaTCTACTGcat ACAGUAGA m7b Disrupted HHHSA_11119_CXXC1|NM_001101654|exon_CDS|-4.10910678284982|1.65022723640357

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50286763A>C COSM366811 LUAD-F00170 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser