SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001114173
Gene Symbol: CTSC
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.88325655T>C COSN1548108 RK048_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5579-5p gacaTACCATAagct UAUGGUAC m7a Created HPSLC_3892_G4606.1_88058823
hsa-miR-567 gACATACTataagct AGUAUGUU m7a Disrupted HPSLC_3892_G4606.1_88058823
hsa-miR-5579-5p gacaTACCATAagct UAUGGUAC m7a Created HPSLC_3892_G4606.1_88058823
hsa-miR-567 gACATACTataagct AGUAUGUU m7a Disrupted HPSLC_3892_G4606.1_88058823

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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