SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0020350
Gene Symbol: CTBP2
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.124993947C>T COSM3806678 TCGA-D8-A1XK-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1972 cccgtggTGGCCTGg UCAGGCCA m7b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-4717-5p cccgtgGTGGCCTgg UAGGCCAC m7b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-1972 cccgtggTGGCCTGg UCAGGCCA m7b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-4717-5p cccgtgGTGGCCTgg UAGGCCAC m7b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-1972 cccgtggTGGCCTGg UCAGGCCA m7b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-4717-5p cccgtgGTGGCCTgg UAGGCCAC m7b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-1972 cccgtggTGGCCTGg UCAGGCCA m7b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-4717-5p cccgtgGTGGCCTgg UAGGCCAC m7b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156

Mutation Mutation ID Sample Name Cancer Type
chr10:g.124993935C>T COSM4012455 TCGA-HU-A4GQ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6870-3p tggtGGATGAGaaag GCUCAUCC m7b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-6870-3p tggtGGATGAGaaag GCUCAUCC m7b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-6870-3p tggtGGATGAGaaag GCUCAUCC m7b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-6870-3p tggtGGATGAGaaag GCUCAUCC m7b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156

Mutation Mutation ID Sample Name Cancer Type
chr10:g.124993934G>A COSM4675289 T3094 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3655 ggtgGACAAGaaagc GCUUGUCG m6b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-578 ggtggACAAGAAagc CUUCUUGU m7b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-3655 ggtgGACAAGaaagc GCUUGUCG m6b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-3912-5p ggTGGACAagaaagc AUGUCCAU m6b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-578 ggtggACAAGAAagc CUUCUUGU m7b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-3655 ggtgGACAAGaaagc GCUUGUCG m6b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-3912-5p ggTGGACAagaaagc AUGUCCAU m6b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-578 ggtggACAAGAAagc CUUCUUGU m7b Created HHHNE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-3655 ggtgGACAAGaaagc GCUUGUCG m6b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-3912-5p ggTGGACAagaaagc AUGUCCAU m6b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156
hsa-miR-578 ggtggACAAGAAagc CUUCUUGU m7b Created HHHSE_4331_CTBP2|NM_001083914|exon_CDS|-4.745105176264|1.33411282806156

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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