SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0084848
Gene Symbol: CPNE3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.86540293C>T COSM4501569 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4311 gaTCTCTTTtaactc GAAAGAGA m7b (m6b->m7b) HPSD3_9793_G13255.1_87552524
hsa-miR-6856-5p gatCTCTCTTaactc AAGAGAGG m7a Disrupted HPSD3_9793_G13255.1_87552524

Mutation Mutation ID Sample Name Cancer Type
chr8:g.86540291C>G COSM1735542 ACINAR04 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-3p aagatctGTCTTAac AUAAGACG m6b Created HPSD3_9793_G13255.1_87552524
hsa-miR-208b-3p aagatctGTCTTAac AUAAGACG m6b Created HPSD3_9793_G13255.1_87552524
hsa-miR-3617-5p aagatcTGTCTTaac AAAGACAU m6b Created HPSD3_9793_G13255.1_87552524
hsa-miR-641 aagatcTGTCTTaac AAAGACAU m6b Created HPSD3_9793_G13255.1_87552524
hsa-miR-6856-5p aagatCTCTCTTaac AAGAGAGG m7a Disrupted HPSD3_9793_G13255.1_87552524

Mutation Mutation ID Sample Name Cancer Type
chr8:g.86540289C>G COSM461401 TCGA-DR-A0ZM-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6856-5p tcaagatCTCTCTTa AAGAGAGG m7a Disrupted HPSD3_9793_G13255.1_87552524
hsa-miR-7161-3p tcAAGATCTctctta UAGAUCUU m7b (m7b->m6b) HPSD3_9793_G13255.1_87552524

Mutation Mutation ID Sample Name Cancer Type
chr8:g.86532569C>G COSM1202163 587300 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-5p cagaaAACTGGAtaa GUCCAGUU m7b Disrupted HHFCT_154987_cluster-22035_1_475
hsa-miR-4328 cagAAAACTGGataa CCAGUUUU m8a Disrupted HHFCT_154987_cluster-22035_1_475
hsa-miR-4436b-5p cagaaAAGTGGAtaa GUCCACUU m7b Created HHFCT_154987_cluster-22035_1_475
hsa-miR-5003-3p caGAAAAGTggataa UACUUUUC m7b (m6b->m7b) HHFCT_154987_cluster-22035_1_475
hsa-miR-5092 cagaaaaGTGGATaa AAUCCACG m6b Created HHFCT_154987_cluster-22035_1_475
hsa-miR-5195-3p cagaaAACTGGATaa AUCCAGUU m8a Disrupted HHFCT_154987_cluster-22035_1_475
hsa-miR-5586-5p cagaaaaCTGGATAa UAUCCAGC m7a Disrupted HHFCT_154987_cluster-22035_1_475
hsa-miR-627-3p cAGAAAAGtggataa UCUUUUCU m7b Created HHFCT_154987_cluster-22035_1_475

Mutation Mutation ID Sample Name Cancer Type
chr8:g.86532551G>C COSM606611 TCGA-55-6712-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-494-3p ctTGTTTCAaatgga UGAAACAU m7a (m6a->m7a) HHFCT_154987_cluster-22035_1_475
hsa-miR-510-3p cttGTTTCAAatgga AUUGAAAC m7b Created HHFCT_154987_cluster-22035_1_475
hsa-miR-607 cttgTTTGAAatgga GUUCAAAU m6b Disrupted HHFCT_154987_cluster-22035_1_475
hsa-miR-6715b-3p cttGTTTGAaatgga CUCAAACC m6b Disrupted HHFCT_154987_cluster-22035_1_475
Mutation Mutation ID Sample Name Cancer Type
chr8:g.86532545T>G COSM1249036 ESO-173 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.86532537G>C COSM122333 HN_62421 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4742-3p gatAATACAGtggtc UCUGUAUU m7b Created HHFCT_154987_cluster-22035_1_475
hsa-miR-6777-3p gataatAGAGTGGtc UCCACUCU m7b Disrupted HHFCT_154987_cluster-22035_1_475

Mutation Mutation ID Sample Name Cancer Type
chr8:g.86532537G>A COSM4981977 3N42-VS-3T42 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255b-2-3p gataataAAGTGGTc AACCACUU m7b Created HHFCT_154987_cluster-22035_1_475
hsa-miR-6777-3p gataatAGAGTGGtc UCCACUCU m7b Disrupted HHFCT_154987_cluster-22035_1_475

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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