SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0084846
Gene Symbol: CPNE3
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.86528995G>T COSM3901875 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-513b-3p tttccaaGACATTTa AAAUGUCA m7a Disrupted HHFKP_142700_cluster-22035_3_27

Mutation Mutation ID Sample Name Cancer Type
chr8:g.86528991C>T COSM4895151 TCGA-RP-A693-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3148 caaTTTTCCAagaca UGGAAAAA m7a Disrupted HHFKP_142700_cluster-22035_3_27
hsa-miR-3978 caatTTTCCAagaca GUGGAAAG m6b Disrupted HHFKP_142700_cluster-22035_3_27
hsa-miR-6124 caaTTTTCCaagaca GGGAAAAG m6b Disrupted HHFKP_142700_cluster-22035_3_27
Mutation Mutation ID Sample Name Cancer Type
chr8:g.86528968G>A COSM3699195 TCGA-AD-6964-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.86528575G>A COSM3952004 308_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p agGTGGCACtgaatg CGUGCCAC m7b (m6b->m7b) HHFKP_142699_cluster-22035_2_33
hsa-miR-148a-3p aggtgGCACTGAatg UCAGUGCA m7a Created HHFKP_142699_cluster-22035_2_33
hsa-miR-148b-3p aggtgGCACTGAatg UCAGUGCA m7a Created HHFKP_142699_cluster-22035_2_33
hsa-miR-152-3p aggtgGCACTGAatg UCAGUGCA m7a Created HHFKP_142699_cluster-22035_2_33
hsa-miR-33b-3p aggtGGCACTGaatg CAGUGCCU m7a Created HHFKP_142699_cluster-22035_2_33
hsa-miR-4276 aggtggCACTGAatg CUCAGUGA m6b Created HHFKP_142699_cluster-22035_2_33
hsa-miR-4715-3p aGGTGGCACtgaatg GUGCCACC m8a (m7a->m8a) HHFKP_142699_cluster-22035_2_33
hsa-miR-1227-3p agGTGGCACtgaatg CGUGCCAC m7b (m6b->m7b) HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-148a-3p aggtgGCACTGAatg UCAGUGCA m7a Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-148b-3p aggtgGCACTGAatg UCAGUGCA m7a Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-152-3p aggtgGCACTGAatg UCAGUGCA m7a Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-33b-3p aggtGGCACTGaatg CAGUGCCU m7a Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-4276 aggtggCACTGAatg CUCAGUGA m6b Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-4715-3p aGGTGGCACtgaatg GUGCCACC m8a (m7a->m8a) HHRBC_12729_BC3-2of3-SCL_5008

Mutation Mutation ID Sample Name Cancer Type
chr8:g.86528574C>T COSM3952003 14_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29a-3p aaggTGGTGCTgaat UAGCACCA m7b Created HHFKP_142699_cluster-22035_2_33
hsa-miR-29b-3p aaggTGGTGCTgaat UAGCACCA m7b Created HHFKP_142699_cluster-22035_2_33
hsa-miR-29c-3p aaggTGGTGCTgaat UAGCACCA m7b Created HHFKP_142699_cluster-22035_2_33
hsa-miR-3065-3p aaggtGGTGCTGAat UCAGCACC m8a Created HHFKP_142699_cluster-22035_2_33
hsa-miR-383-3p aaggtgGTGCTGaat ACAGCACU m6b Created HHFKP_142699_cluster-22035_2_33
hsa-miR-6871-3p aaggtGGTGCTGaat CAGCACCC m7a Created HHFKP_142699_cluster-22035_2_33
hsa-miR-29a-3p aaggTGGTGCTgaat UAGCACCA m7b Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-29b-3p aaggTGGTGCTgaat UAGCACCA m7b Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-29c-3p aaggTGGTGCTgaat UAGCACCA m7b Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-3065-3p aaggtGGTGCTGAat UCAGCACC m8a Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-383-3p aaggtgGTGCTGaat ACAGCACU m6b Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-6871-3p aaggtGGTGCTGaat CAGCACCC m7a Created HHRBC_12729_BC3-2of3-SCL_5008

Mutation Mutation ID Sample Name Cancer Type
chr8:g.86528552G>A COSM223288 ME009T [skin][trunk][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1229-5p catggCTACCCAgtg GUGGGUAG m7b Created HHFKP_142699_cluster-22035_2_33
hsa-miR-1285-3p catggcTGCCCAGtg UCUGGGCA m7b Disrupted HHFKP_142699_cluster-22035_2_33
hsa-miR-197-5p catggCTACCCagtg CGGGUAGA m6b Created HHFKP_142699_cluster-22035_2_33
hsa-miR-3187-5p catggcTGCCCAGtg CCUGGGCA m7b Disrupted HHFKP_142699_cluster-22035_2_33
hsa-miR-5189-5p catggcTGCCCAGtg UCUGGGCA m7b Disrupted HHFKP_142699_cluster-22035_2_33
hsa-miR-612 catggcTGCCCAGtg GCUGGGCA m7b Disrupted HHFKP_142699_cluster-22035_2_33
hsa-miR-6860 catggcTGCCCAGTg ACUGGGCA m8a Disrupted HHFKP_142699_cluster-22035_2_33
hsa-miR-6861-5p catggcTACCCAGTg ACUGGGUA m8a Created HHFKP_142699_cluster-22035_2_33
hsa-miR-1229-5p catggCTACCCAgtg GUGGGUAG m7b Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-1285-3p catggcTGCCCAGtg UCUGGGCA m7b Disrupted HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-197-5p catggCTACCCagtg CGGGUAGA m6b Created HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-3187-5p catggcTGCCCAGtg CCUGGGCA m7b Disrupted HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-5189-5p catggcTGCCCAGtg UCUGGGCA m7b Disrupted HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-612 catggcTGCCCAGtg GCUGGGCA m7b Disrupted HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-6860 catggcTGCCCAGTg ACUGGGCA m8a Disrupted HHRBC_12729_BC3-2of3-SCL_5008
hsa-miR-6861-5p catggcTACCCAGTg ACUGGGUA m8a Created HHRBC_12729_BC3-2of3-SCL_5008

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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