SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001190456
Gene Symbol: CORO2B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.68710868G>A COSM4674235 T3535 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6858-3p agcGCTGGCTacgac CAGCCAGC m7b Disrupted HHFKP_50803_cluster-7445_1_39
hsa-miR-4676-5p agcgCTGGCTacgac GAGCCAGU m6b Disrupted HHFCT_53430_cluster-7445_4_23
hsa-miR-575 agcgCTGGCTacgac GAGCCAGU m6b Disrupted HHFCT_53430_cluster-7445_4_23
hsa-miR-6858-3p agcGCTGGCTacgac CAGCCAGC m7b Disrupted HHFCT_53430_cluster-7445_4_23
hsa-miR-4676-5p agcgCTGGCTacgac GAGCCAGU m6b Disrupted HHFKP_50803_cluster-7445_1_39
hsa-miR-4738-5p aGCGCTGGctacgac ACCAGCGC m7b Disrupted HHFKP_50803_cluster-7445_1_39
hsa-miR-575 agcgCTGGCTacgac GAGCCAGU m6b Disrupted HHFKP_50803_cluster-7445_1_39

Mutation Mutation ID Sample Name Cancer Type
chr15:g.68710864G>T COSM4578447 CHEWS031 [bone][extraskeletal][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3160-3p gtTCAGCTCTggcta AGAGCUGA m8a Created HHFKP_50803_cluster-7445_1_39
hsa-miR-6858-3p gttcagcGCTGGCTa CAGCCAGC m7b Disrupted HHFCT_53430_cluster-7445_4_23
hsa-miR-4738-5p gttcaGCGCTGGcta ACCAGCGC m7b Disrupted HHFCT_53430_cluster-7445_4_23
hsa-miR-4738-5p gttcaGCGCTGGcta ACCAGCGC m7b Disrupted HHFKP_50803_cluster-7445_1_39
hsa-miR-6858-3p gttcagcGCTGGCTa CAGCCAGC m7b Disrupted HHFKP_50803_cluster-7445_1_39
hsa-miR-3160-3p gtTCAGCTCTggcta AGAGCUGA m8a Created HHFCT_53430_cluster-7445_4_23

Mutation Mutation ID Sample Name Cancer Type
chr15:g.68678026A>G COSN6278805 RK140_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4312 aggggCAAGGCagcc GGCCUUGU m6b Disrupted HPRT3_9562_G12576.1_68970363
hsa-miR-324-3p aGGGGCAGggcagcc ACUGCCCC m7b Created HPRT3_9562_G12576.1_68970363
hsa-miR-3173-5p agggGCAGGGCAgcc UGCCCUGC m8a Created HPRT3_9562_G12576.1_68970363
hsa-miR-1915-5p aggGGCAAGGcagcc ACCUUGCC m7b Disrupted HPRT3_9562_G12576.1_68970363
hsa-miR-18a-3p aggggcAGGGCAGcc ACUGCCCU m7b Created HPRT3_9562_G12576.1_68970363
hsa-miR-874-3p aggggCAGGGCAGcc CUGCCCUG m8a Created HPRT3_9562_G12576.1_68970363
hsa-miR-6882-3p aggggcaAGGCAGCc UGCUGCCU m7b Disrupted HPRT3_9562_G12576.1_68970363
hsa-miR-6799-3p agggGCAGGGCAgcc UGCCCUGC m8a Created HPRT3_9562_G12576.1_68970363
hsa-miR-6752-3p aggGGCAGGGcagcc UCCCUGCC m7b Created HPRT3_9562_G12576.1_68970363

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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