SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001143887
Gene Symbol: COPS2

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr15:g.49134414T>G COSM3420390 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr15:g.49129530C>T COSM3987990 TCGA-MH-A55Z-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6500-3p ACAAGTGTttataaa ACACUUGU m8a Created HPHES_2997_G3932.1_49421712
hsa-miR-340-5p acaagtgTTTATAAa UUAUAAAG m7a Created HPHES_2997_G3932.1_49421712

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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