SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001037763
Gene Symbol: COL28A1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.7423530T>A COSN5662810 RK002_C [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-630 ccaAGAATACacacg AGUAUUCU m7b Disrupted HHRBC_11759_BC3-2of3-SCL_3910
hsa-miR-223-5p ccaagAATACACacg CGUGUAUU m7b Disrupted HHRBC_11759_BC3-2of3-SCL_3910
hsa-miR-630 ccaAGAATACacacg AGUAUUCU m7b Disrupted HHRBC_11759_BC3-2of3-SCL_3910
hsa-miR-223-5p ccaagAATACACacg CGUGUAUU m7b Disrupted HHRBC_11759_BC3-2of3-SCL_3910

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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