SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0044560
Gene Symbol: COL1A1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.50196633G>A COSM3519052 TCGA-EE-A180-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-634 gaTGCTGGTcctgct AACCAGCA m7b (m7b->m6b) HHFKP_60375_uc002iqm.1_8_34
hsa-miR-3617-3p gaTGCTGATcctgct CAUCAGCA m7b (m6b->m7b) HHFKP_60375_uc002iqm.1_8_34
hsa-miR-1286 gatgctgGTCCTGCt UGCAGGAC m7b Disrupted HHFKP_60375_uc002iqm.1_8_34

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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