SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0071725
Gene Symbol: CLPTM1L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.1341826A>G COSM4944766 RK225_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-593-3p aacgAGAGACAatgg UGUCUCUG m7a Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-6818-3p aacgAGAGACAAtgg UUGUCUCU m8a Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-6895-3p aacGAGAGACAatgg UGUCUCUC m8a Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1341811T>C COSM116192 TCGA-24-1555-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p gacgctgCATGCCTa AGGCAUGG m7a Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-5689 gacgcTGTATGCcta AGCAUACA m7b Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1341807C>T COSM3918641 TCGA-EE-A3J3-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3668 ctgtatgTCTACATc AAUGUAGA m7b Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-5689 cTGTATGCctacatc AGCAUACA m7b Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-6806-5p ctgtaTGCCTACAtc UGUAGGCA m8a Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-3668 ctgtatgTCTACATc AAUGUAGA m7b Created HPKTA_49560_G53590.1_1341924
hsa-miR-5689 cTGTATGCctacatc AGCAUACA m7b Disrupted HPKTA_49560_G53590.1_1341924
hsa-miR-6806-5p ctgtaTGCCTACAtc UGUAGGCA m8a Disrupted HPKTA_49560_G53590.1_1341924

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1341801T>A COSM307403 T166 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p gcctACAACTTCctc GAAGUUGU m8a Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-382-5p gcctACAACTTCctc GAAGUUGU m8a Created HPKTA_49560_G53590.1_1341924

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1341795T>C COSM1433528 TCGA-AA-3861-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1275 atctTCCCCCAtcac GUGGGGGA m7b Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-3928-3p atcTTCCTCCatcac GGAGGAAC m7a Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-4271 atCTTCCCCCatcac GGGGGAAG m8a Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-4525 atctTCCCCCatcac GGGGGGAU m6b Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-4534 atcttcCTCCATCac GGAUGGAG m7b Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-4665-5p atctTCCCCCAtcac CUGGGGGA m7b Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-4725-3p atCTTCCCCcatcac UGGGGAAG m7b (m6b->m7b) HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-4802-5p atcttCCTCCATcac UAUGGAGG m7b Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-5010-5p atctTCCCCCatcac AGGGGGAU m6b Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-625-5p atcTTCCCCCatcac AGGGGGAA m7b Created HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-6780b-5p atCTTCCCCcatcac UGGGGAAG m7b (m6b->m7b) HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-6894-5p atctTCCTCCatcac AGGAGGAU m6b Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-7154-3p atctTCCTCCatcac AGGAGGAC m6b Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-766-5p atcTTCCTCCatcac AGGAGGAA m7b Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-8082 atcttcCTCCATCAc UGAUGGAG m8a Disrupted HHKTA_26986_NM_030782|339|378|2.76914822731246|5.76882585383924
hsa-miR-1275 atctTCCCCCAtcac GUGGGGGA m7b Created HPKTA_49560_G53590.1_1341924
hsa-miR-3928-3p atcTTCCTCCatcac GGAGGAAC m7a Disrupted HPKTA_49560_G53590.1_1341924
hsa-miR-4271 atCTTCCCCCatcac GGGGGAAG m8a Created HPKTA_49560_G53590.1_1341924
hsa-miR-4525 atctTCCCCCatcac GGGGGGAU m6b Created HPKTA_49560_G53590.1_1341924
hsa-miR-4534 atcttcCTCCATCac GGAUGGAG m7b Disrupted HPKTA_49560_G53590.1_1341924
hsa-miR-4665-5p atctTCCCCCAtcac CUGGGGGA m7b Created HPKTA_49560_G53590.1_1341924
hsa-miR-4725-3p atCTTCCCCcatcac UGGGGAAG m7b (m6b->m7b) HPKTA_49560_G53590.1_1341924
hsa-miR-4802-5p atcttCCTCCATcac UAUGGAGG m7b Disrupted HPKTA_49560_G53590.1_1341924
hsa-miR-5010-5p atctTCCCCCatcac AGGGGGAU m6b Created HPKTA_49560_G53590.1_1341924
hsa-miR-625-5p atcTTCCCCCatcac AGGGGGAA m7b Created HPKTA_49560_G53590.1_1341924
hsa-miR-6780b-5p atCTTCCCCcatcac UGGGGAAG m7b (m6b->m7b) HPKTA_49560_G53590.1_1341924
hsa-miR-6894-5p atctTCCTCCatcac AGGAGGAU m6b Disrupted HPKTA_49560_G53590.1_1341924
hsa-miR-7154-3p atctTCCTCCatcac AGGAGGAC m6b Disrupted HPKTA_49560_G53590.1_1341924
hsa-miR-766-5p atcTTCCTCCatcac AGGAGGAA m7b Disrupted HPKTA_49560_G53590.1_1341924
hsa-miR-8082 atcttcCTCCATCAc UGAUGGAG m8a Disrupted HPKTA_49560_G53590.1_1341924

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1341786C>A COSM1060947 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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