SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0071720
Gene Symbol: CLPTM1L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.1338935C>T COSM1060896 TCGA-BG-A186-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p cgGCTGGTGctgaac UCACCAGC m7b (m6b->m7b) HHFKP_112377_cluster-18480_19_207
hsa-miR-29a-3p cggcTGGTGCTgaac UAGCACCA m7b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-29b-3p cggcTGGTGCTgaac UAGCACCA m7b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-29c-3p cggcTGGTGCTgaac UAGCACCA m7b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-3065-3p cggctGGTGCTGAac UCAGCACC m8a Created HHFKP_112377_cluster-18480_19_207
hsa-miR-3194-5p cGGCTGGCgctgaac GGCCAGCC m7b Disrupted HHFKP_112377_cluster-18480_19_207
hsa-miR-383-3p cggctgGTGCTGaac ACAGCACU m6b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-6871-3p cggctGGTGCTGaac CAGCACCC m7a Created HHFKP_112377_cluster-18480_19_207
Mutation Mutation ID Sample Name Cancer Type
chr5:g.1338931G>A COSM589601 TCGA-49-6745-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1338930A>T COSM3608568 TCGA-D3-A5GU-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.1338928C>T COSM735669 TCGA-D3-A5GU-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-5p cgctgAATGTGAtgg UUCACAUU m7b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-181a-5p cgcTGAATGTgatgg AACAUUCA m7b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-181b-5p cgcTGAATGTgatgg AACAUUCA m7b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-181c-5p cgcTGAATGTgatgg AACAUUCA m7b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-181d-5p cgcTGAATGTgatgg AACAUUCA m7b Created HHFKP_112377_cluster-18480_19_207
hsa-miR-23a-3p cgctgAATGTGATgg AUCACAUU m8a Created HHFKP_112377_cluster-18480_19_207
hsa-miR-23b-3p cgctgAATGTGATgg AUCACAUU m8a Created HHFKP_112377_cluster-18480_19_207
hsa-miR-23c cgctgAATGTGATgg AUCACAUU m8a Created HHFKP_112377_cluster-18480_19_207
hsa-miR-4262 cgcTGAATGTgatgg GACAUUCA m7b Created HHFKP_112377_cluster-18480_19_207

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1334342TG>G COSM3137890 CCK81 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1283 gaattTTTGTAGAtac UCUACAAA m8a Disrupted HHFKP_112376_cluster-18480_18_36
hsa-miR-3613-3p gaaTTTTTGTagatac ACAAAAAA m7a Disrupted HHFKP_112376_cluster-18480_18_36
hsa-miR-520d-5p gaattTTTGTAGatac CUACAAAG m7a Disrupted HHFKP_112376_cluster-18480_18_36
hsa-miR-524-5p gaattTTTGTAGatac CUACAAAG m7a Disrupted HHFKP_112376_cluster-18480_18_36
hsa-miR-1283 gaattTTTGTAGAtac UCUACAAA m8a Disrupted HHHNE_3919_CLPTM1L|NM_030782|exon_CDS|-6.27305292583323|1.52509044467582
hsa-miR-3613-3p gaaTTTTTGTagatac ACAAAAAA m7a Disrupted HHHNE_3919_CLPTM1L|NM_030782|exon_CDS|-6.27305292583323|1.52509044467582
hsa-miR-520d-5p gaattTTTGTAGatac CUACAAAG m7a Disrupted HHHNE_3919_CLPTM1L|NM_030782|exon_CDS|-6.27305292583323|1.52509044467582
hsa-miR-524-5p gaattTTTGTAGatac CUACAAAG m7a Disrupted HHHNE_3919_CLPTM1L|NM_030782|exon_CDS|-6.27305292583323|1.52509044467582
hsa-miR-1283 gaattTTTGTAGAtac UCUACAAA m8a Disrupted HHHSE_3919_CLPTM1L|NM_030782|exon_CDS|-6.27305292583323|1.52509044467582
hsa-miR-3613-3p gaaTTTTTGTagatac ACAAAAAA m7a Disrupted HHHSE_3919_CLPTM1L|NM_030782|exon_CDS|-6.27305292583323|1.52509044467582
hsa-miR-520d-5p gaattTTTGTAGatac CUACAAAG m7a Disrupted HHHSE_3919_CLPTM1L|NM_030782|exon_CDS|-6.27305292583323|1.52509044467582
hsa-miR-524-5p gaattTTTGTAGatac CUACAAAG m7a Disrupted HHHSE_3919_CLPTM1L|NM_030782|exon_CDS|-6.27305292583323|1.52509044467582

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1331847A>G COSM4443000 C608 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4738-3p tgacatCAGTTTCtg UGAAACUG m7b Disrupted HHFCT_121594_cluster-18480_17_36
hsa-miR-4738-3p tgacatCAGTTTCtg UGAAACUG m7b Disrupted HHFKP_112375_cluster-18480_17_25

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1331836G>T COSM32738 HCC1395 [breast][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3180-5p TCTGGAAGaagaaga CUUCCAGA m8a Disrupted HHFCT_121594_cluster-18480_17_36
hsa-miR-4659a-3p tctggaAGAAGAAga UUUCUUCU m7b Disrupted HHFCT_121594_cluster-18480_17_36
hsa-miR-4659b-3p tctggaAGAAGAAga UUUCUUCU m7b Disrupted HHFCT_121594_cluster-18480_17_36
hsa-miR-4778-3p tctgGAAGAAGAaga UCUUCUUC m8a Disrupted HHFCT_121594_cluster-18480_17_36
hsa-miR-6875-3p tctGGAAGAAgaaga AUUCUUCC m7b Disrupted HHFCT_121594_cluster-18480_17_36
hsa-miR-3180-5p TCTGGAAGaagaaga CUUCCAGA m8a Disrupted HHFKP_112375_cluster-18480_17_25
hsa-miR-4659a-3p tctggaAGAAGAAga UUUCUUCU m7b Disrupted HHFKP_112375_cluster-18480_17_25
hsa-miR-4659b-3p tctggaAGAAGAAga UUUCUUCU m7b Disrupted HHFKP_112375_cluster-18480_17_25
hsa-miR-4778-3p tctgGAAGAAGAaga UCUUCUUC m8a Disrupted HHFKP_112375_cluster-18480_17_25
hsa-miR-6875-3p tctGGAAGAAgaaga AUUCUUCC m7b Disrupted HHFKP_112375_cluster-18480_17_25
Mutation Mutation ID Sample Name Cancer Type
chr5:g.1330335A>G COSM4185418 BK0002 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.1330326C>T COSM4382475 262T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-452-3p gagCAGATGAGcctg CUCAUCUG m8a Created HHFCT_121593_cluster-18480_16_5468

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1330326C>G COSM4672909 T2225 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4268 gagcaGAGGAGCCtg GGCUCCUC m8a Created HHFCT_121593_cluster-18480_16_5468
hsa-miR-6780a-3p gagCAGAGGAGcctg CUCCUCUG m8a Created HHFCT_121593_cluster-18480_16_5468

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1330323G>C COSM4924523 TCGA-CC-A7IJ-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3155a cagacGAGCCTGctg CCAGGCUC m7b Disrupted HHFCT_121593_cluster-18480_16_5468
hsa-miR-3155b cagacGAGCCTGctg CCAGGCUC m7b Disrupted HHFCT_121593_cluster-18480_16_5468
hsa-miR-4690-5p cagacgaGCCTGCTg GAGCAGGC m7b Disrupted HHFCT_121593_cluster-18480_16_5468
hsa-miR-484 cagacGAGCCTGctg UCAGGCUC m7b Disrupted HHFCT_121593_cluster-18480_16_5468
hsa-miR-6510-5p cagacgaCCCTGCTg CAGCAGGG m7b Created HHFCT_121593_cluster-18480_16_5468

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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