SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0071717
Gene Symbol: CLPTM1L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.1323869G>T COSM1541414 TCGA-97-7937-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1269a cctgCAGTCCAtgaa CUGGACUG m7b Created HHFCT_121591_cluster-18480_14_200
hsa-miR-1269b cctgCAGTCCAtgaa CUGGACUG m7b Created HHFCT_121591_cluster-18480_14_200
hsa-miR-1288-3p cctGCAGTCCAtgaa UGGACUGC m8a Created HHFCT_121591_cluster-18480_14_200
hsa-miR-4418 cCTGCAGTccatgaa CACUGCAG m7b Created HHFCT_121591_cluster-18480_14_200
hsa-miR-4515 cctgCAGTCCatgaa AGGACUGG m6b Created HHFCT_121591_cluster-18480_14_200
hsa-miR-4740-5p cctgCAGTCCatgaa AGGACUGA m6b Created HHFCT_121591_cluster-18480_14_200
hsa-miR-490-5p cctgcagTCCATGaa CCAUGGAU m6b Created HHFCT_121591_cluster-18480_14_200
hsa-miR-6735-3p cctgCAGGCCatgaa AGGCCUGU m6b Disrupted HHFCT_121591_cluster-18480_14_200

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1323853C>T COSM1695347 YULAN [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-5p tactTGTCATacctg AAUGACAC m6b Disrupted HHFCT_121590_cluster-18480_13_190
hsa-miR-425-5p tactTGTCATacctg AAUGACAC m6b Disrupted HHFKP_112370_cluster-18480_12_417

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1323839C>T COSM3608517 TCGA-D3-A51J-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6758-5p gctgtacCCTCTCTg UAGAGAGG m7b Disrupted HHFCT_121590_cluster-18480_13_190
hsa-miR-6841-5p gctGTACCCTctctg UAGGGUAC m7b Disrupted HHFCT_121590_cluster-18480_13_190
hsa-miR-6856-5p gctgtacCCTCTCTg AAGAGAGG m7b Disrupted HHFCT_121590_cluster-18480_13_190
hsa-miR-6758-5p gctgtacCCTCTCTg UAGAGAGG m7b Disrupted HHFKP_112370_cluster-18480_12_417
hsa-miR-6841-5p gctGTACCCTctctg UAGGGUAC m7b Disrupted HHFKP_112370_cluster-18480_12_417
hsa-miR-6856-5p gctgtacCCTCTCTg AAGAGAGG m7b Disrupted HHFKP_112370_cluster-18480_12_417

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1323828C>T COSM4462270 CSCC-54-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6793-3p tctgtGTTGGGGgtg UCCCCAAC m7b Created HHFCT_121590_cluster-18480_13_190
hsa-miR-6793-3p tctgtGTTGGGGgtg UCCCCAAC m7b Created HHFKP_112370_cluster-18480_12_417

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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