SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0071713
Gene Symbol: CLPTM1L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.1321813A>G COSM4799646 CHC1180T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-3p ggggtctGTGCCTTt UAAGGCAC m7b Created HHFKP_112368_cluster-18480_10_99
hsa-miR-3910 ggggtctATGCCTTt AAAGGCAU m7b Disrupted HHFKP_112368_cluster-18480_10_99
hsa-miR-506-3p ggggtctGTGCCTTt UAAGGCAC m7b Created HHFKP_112368_cluster-18480_10_99
hsa-miR-5582-5p ggggtcTGTGCCTtt UAGGCACA m7b Created HHFKP_112368_cluster-18480_10_99

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1321779C>T COSM4992243 S06-38853-TP [skin][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1276 cccaGCTCTTTgtga UAAAGAGC m7b Disrupted HHFCT_121589_cluster-18480_12_443
hsa-miR-320a ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFCT_121589_cluster-18480_12_443
hsa-miR-320b ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFCT_121589_cluster-18480_12_443
hsa-miR-320c ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFCT_121589_cluster-18480_12_443
hsa-miR-320d ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFCT_121589_cluster-18480_12_443
hsa-miR-320e cCCAGCTTTttgtga AAAGCUGG m8a (m7a->m8a) HHFCT_121589_cluster-18480_12_443
hsa-miR-4429 ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFCT_121589_cluster-18480_12_443
hsa-miR-4487 cCCAGCTCTttgtga AGAGCUGG m8a (m8a->m7a) HHFCT_121589_cluster-18480_12_443
hsa-miR-1276 cccaGCTCTTTgtga UAAAGAGC m7b Disrupted HHFKP_112368_cluster-18480_10_99
hsa-miR-320a ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFKP_112368_cluster-18480_10_99
hsa-miR-320b ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFKP_112368_cluster-18480_10_99
hsa-miR-320c ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFKP_112368_cluster-18480_10_99
hsa-miR-320d ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFKP_112368_cluster-18480_10_99
hsa-miR-320e cCCAGCTTTttgtga AAAGCUGG m8a (m7a->m8a) HHFKP_112368_cluster-18480_10_99
hsa-miR-4429 ccCAGCTTTTtgtga AAAAGCUG m8a Created HHFKP_112368_cluster-18480_10_99
hsa-miR-4487 cCCAGCTCTttgtga AGAGCUGG m8a (m8a->m7a) HHFKP_112368_cluster-18480_10_99
hsa-miR-1276 cccaGCTCTTTgtga UAAAGAGC m7b Disrupted HHRBL_11152_BCBL1-2of3-SCL_13362
hsa-miR-320a ccCAGCTTTTtgtga AAAAGCUG m8a Created HHRBL_11152_BCBL1-2of3-SCL_13362
hsa-miR-320b ccCAGCTTTTtgtga AAAAGCUG m8a Created HHRBL_11152_BCBL1-2of3-SCL_13362
hsa-miR-320c ccCAGCTTTTtgtga AAAAGCUG m8a Created HHRBL_11152_BCBL1-2of3-SCL_13362
hsa-miR-320d ccCAGCTTTTtgtga AAAAGCUG m8a Created HHRBL_11152_BCBL1-2of3-SCL_13362
hsa-miR-320e cCCAGCTTTttgtga AAAGCUGG m8a (m7a->m8a) HHRBL_11152_BCBL1-2of3-SCL_13362
hsa-miR-4429 ccCAGCTTTTtgtga AAAAGCUG m8a Created HHRBL_11152_BCBL1-2of3-SCL_13362
hsa-miR-4487 cCCAGCTCTttgtga AGAGCUGG m8a (m8a->m7a) HHRBL_11152_BCBL1-2of3-SCL_13362

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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