SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0071707
Gene Symbol: CLPTM1L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.1318404G>A COSM4529058 CSCC-35-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p gtCCTACAaggagaa AUGUAGGG m6b Created HHFKP_112363_cluster-18480_5_38
hsa-miR-4279 gtcctacGAGGAGAa CUCUCCUC m7b Disrupted HHFKP_112363_cluster-18480_5_38
hsa-miR-8065 gTCCTACAaggagaa UGUAGGAA m7a Created HHFKP_112363_cluster-18480_5_38

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1318399G>C COSM1541436 TCGA-75-6214-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-3p acgAGGACAAggcca AUUGUCCU m7b Created HHFKP_112363_cluster-18480_5_38
hsa-miR-3909 acGAGGACAaggcca UGUCCUCU m7a (m6a->m7a) HHFKP_112363_cluster-18480_5_38
hsa-miR-4279 acGAGGAGAaggcca CUCUCCUC m7b (m7b->m6b) HHFKP_112363_cluster-18480_5_38
hsa-miR-4312 acgaggACAAGGCCa GGCCUUGU m8a Created HHFKP_112363_cluster-18480_5_38
hsa-miR-676-3p acgAGGACAaggcca CUGUCCUA m6b Created HHFKP_112363_cluster-18480_5_38
hsa-miR-6852-3p acGAGGACAaggcca UGUCCUCU m7a (m6a->m7a) HHFKP_112363_cluster-18480_5_38

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1318391C>T COSM1433288 HCT15 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1204 aaGGCCACGcgggcg UCGUGGCC m7b (m7b->m6b) HHFKP_112363_cluster-18480_5_38
hsa-miR-1471 aaggccACGCGGGCg GCCCGCGU m8a Disrupted HHFKP_112363_cluster-18480_5_38

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1318303T>A COSN4893753 CME_0001_Pa_C [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHFCT_121587_cluster-18480_9_73
hsa-miR-155-5p aAGCATTAggaggaa UUAAUGCU m7b Created HHFCT_121587_cluster-18480_9_73
hsa-miR-4691-5p aagcattTGGAGGAa GUCCUCCA m7b Disrupted HHFCT_121587_cluster-18480_9_73
hsa-miR-5193 aagcattAGGAGGAa UCCUCCUC m7a Created HHFCT_121587_cluster-18480_9_73
hsa-miR-519d-5p aagcaTTTGGAGGaa CCUCCAAA m8a Disrupted HHFCT_121587_cluster-18480_9_73
hsa-miR-660-3p aagcattAGGAGGaa ACCUCCUG m6b Created HHFCT_121587_cluster-18480_9_73
hsa-miR-6792-3p aagcattTGGAGGAa CUCCUCCA m7b Disrupted HHFCT_121587_cluster-18480_9_73
hsa-miR-7853-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHFCT_121587_cluster-18480_9_73
hsa-miR-105-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHFKP_112362_cluster-18480_4_762
hsa-miR-155-5p aAGCATTAggaggaa UUAAUGCU m7b Created HHFKP_112362_cluster-18480_4_762
hsa-miR-4691-5p aagcattTGGAGGAa GUCCUCCA m7b Disrupted HHFKP_112362_cluster-18480_4_762
hsa-miR-5193 aagcattAGGAGGAa UCCUCCUC m7a Created HHFKP_112362_cluster-18480_4_762
hsa-miR-519d-5p aagcaTTTGGAGGaa CCUCCAAA m8a Disrupted HHFKP_112362_cluster-18480_4_762
hsa-miR-660-3p aagcattAGGAGGaa ACCUCCUG m6b Created HHFKP_112362_cluster-18480_4_762
hsa-miR-6792-3p aagcattTGGAGGAa CUCCUCCA m7b Disrupted HHFKP_112362_cluster-18480_4_762
hsa-miR-7853-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHFKP_112362_cluster-18480_4_762
hsa-miR-105-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-155-5p aAGCATTAggaggaa UUAAUGCU m7b Created HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-4691-5p aagcattTGGAGGAa GUCCUCCA m7b Disrupted HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-5193 aagcattAGGAGGAa UCCUCCUC m7a Created HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-519d-5p aagcaTTTGGAGGaa CCUCCAAA m8a Disrupted HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-660-3p aagcattAGGAGGaa ACCUCCUG m6b Created HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-6792-3p aagcattTGGAGGAa CUCCUCCA m7b Disrupted HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-7853-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-105-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-155-5p aAGCATTAggaggaa UUAAUGCU m7b Created HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-4691-5p aagcattTGGAGGAa GUCCUCCA m7b Disrupted HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-5193 aagcattAGGAGGAa UCCUCCUC m7a Created HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-519d-5p aagcaTTTGGAGGaa CCUCCAAA m8a Disrupted HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-660-3p aagcattAGGAGGaa ACCUCCUG m6b Created HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-6792-3p aagcattTGGAGGAa CUCCUCCA m7b Disrupted HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-7853-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-105-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHKTA_49996_NM_030782|1710|1749|1.38457411365623|5.76882585383924
hsa-miR-155-5p aAGCATTAggaggaa UUAAUGCU m7b Created HHKTA_49996_NM_030782|1710|1749|1.38457411365623|5.76882585383924
hsa-miR-4691-5p aagcattTGGAGGAa GUCCUCCA m7b Disrupted HHKTA_49996_NM_030782|1710|1749|1.38457411365623|5.76882585383924
hsa-miR-5193 aagcattAGGAGGAa UCCUCCUC m7a Created HHKTA_49996_NM_030782|1710|1749|1.38457411365623|5.76882585383924
hsa-miR-519d-5p aagcaTTTGGAGGaa CCUCCAAA m8a Disrupted HHKTA_49996_NM_030782|1710|1749|1.38457411365623|5.76882585383924
hsa-miR-660-3p aagcattAGGAGGaa ACCUCCUG m6b Created HHKTA_49996_NM_030782|1710|1749|1.38457411365623|5.76882585383924
hsa-miR-6792-3p aagcattTGGAGGAa CUCCUCCA m7b Disrupted HHKTA_49996_NM_030782|1710|1749|1.38457411365623|5.76882585383924
hsa-miR-7853-5p aaGCATTTGgaggaa UCAAAUGC m7b (m7b->m6b) HHKTA_49996_NM_030782|1710|1749|1.38457411365623|5.76882585383924

Mutation Mutation ID Sample Name Cancer Type
chr5:g.1318281G>A COSN5069197 HCC113T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HHFKP_112362_cluster-18480_4_762
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HPKTA_49559_G53589.1_1318392
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HHFCT_121587_cluster-18480_9_73
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HHFKP_112362_cluster-18480_4_762
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HHHNA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HHHSA_17664_CLPTM1L|NM_030782|exon_utr3|-6.09000798626151|1.97239480281556
hsa-miR-106a-3p aCATTGCAttttctg CUGCAAUG m7b Created HPKTA_49559_G53589.1_1318392

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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