SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_046313
Gene Symbol: CHRNA3
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.78593220A>C COSM3988158 TCGA-BQ-7062-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5681b atatattAATACCag AGGUAUUG m6b Disrupted HPKTA_21366_G23010.1_78885570

Mutation Mutation ID Sample Name Cancer Type
chr15:g.78593167G>A COSM243694 587350 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7849-3p ttCAATTGTtggatc GACAAUUG m7b (m7b->m6b) HHFKP_51203_uc002bdy.1_5_31
hsa-miR-323b-3p ttcaatTATTGGatc CCCAAUAC m6b Created HHFKP_51203_uc002bdy.1_5_31

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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