SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001025197
Gene Symbol: CHI3L2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.111230860C>T COSM168742 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3646 aTTCATTTgccagca AAAAUGAA m7b Created HPSLB_207_G254.1_111773474
hsa-miR-3128 attcatTTGCCAGca UCUGGCAA m7b Created HPSLB_207_G254.1_111773474

Mutation Mutation ID Sample Name Cancer Type
chr1:g.111230859T>G COSM3471160 TCGA-FS-A1ZH-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6722-5p tattcaTGCGCCagc AGGCGCAC m6b Created HPSLB_207_G254.1_111773474

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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