SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0062711
Gene Symbol: CHEK2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.28696193G>A COSN6692546 CHC320T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-151a-3p acactggAGTCTAag CUAGACUG m6b Created HHFKP_92987_cluster-15515_1_8
hsa-miR-7702 acactggAGTCTAAg CUUAGACU m7b Created HHFKP_92987_cluster-15515_1_8
hsa-miR-508-5p acaCTGGAGTctaag UACUCCAG m7b Created HHFKP_92987_cluster-15515_1_8
hsa-miR-3925-3p acACTGGAGTctaag ACUCCAGU m8a Created HHFKP_92987_cluster-15515_1_8

Mutation Mutation ID Sample Name Cancer Type
chr22:g.28695137C>T COSM4467527 CSCC-52-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6505-3p cAGAAGTCtcagaga UGACUUCU m7b Disrupted HHFCT_99723_cluster-15515_2_81
hsa-miR-6864-3p cagaAGTCTCAgaga GUGAGACU m7b Disrupted HHFCT_99723_cluster-15515_2_81
hsa-miR-873-3p cagaAGTCTCagaga GGAGACUG m6b Disrupted HHFCT_99723_cluster-15515_2_81
hsa-miR-4653-5p cagaagtCTCAGAGa UCUCUGAG m7b Disrupted HHFCT_99723_cluster-15515_2_81
hsa-miR-4329 cagaaGTCTCAGaga CCUGAGAC m7b Disrupted HHFCT_99723_cluster-15515_2_81
hsa-miR-4251 cagaagTCTCAGaga CCUGAGAA m6b Disrupted HHFCT_99723_cluster-15515_2_81
hsa-miR-3921 cagaagtCTCAGAGa UCUCUGAG m7b Disrupted HHFCT_99723_cluster-15515_2_81
hsa-miR-3672 cagaAGTCTCAgaga AUGAGACU m7b Disrupted HHFCT_99723_cluster-15515_2_81
hsa-miR-146a-3p cagaagtTTCAGAGa CCUCUGAA m7b Created HHFCT_99723_cluster-15515_2_81

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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