SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0061636
Gene Symbol: CHAF1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.36413167C>T COSM4464655 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1321 cagggacCCTCCCTc CAGGGAGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-149-3p cagggaCCCTCCCTc AGGGAGGG m8a Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-2114-5p cAGGGACTctccctc UAGUCCCU m7b Created HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-4728-5p cagggaCCCTCCCtc UGGGAGGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-4739 cagggacCCTCCCTc AAGGGAGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-4756-5p cagggacCCTCCCTc CAGGGAGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-5192 cagggACTCTCCctc AGGAGAGU m7b Created HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-6731-5p cagggaCTCTCCCtc UGGGAGAG m7b Created HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-6760-5p cagggacTCTCCCTc CAGGGAGA m7b Created HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-6785-5p cagggaCCCTCCCtc UGGGAGGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-6883-5p cagggaCCCTCCCTc AGGGAGGG m8a Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-8085 cagggaCTCTCCCtc UGGGAGAG m7b Created HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854

Mutation Mutation ID Sample Name Cancer Type
chr21:g.36413166C>T COSM1414003 TCGA-D5-6529-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-149-3p tcagggaCCCTCCCt AGGGAGGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-4661-3p tcagGGATCCTccct CAGGAUCC m7b Created HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-4728-5p tcagggaCCCTCCCt UGGGAGGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-6785-5p tcagggaCCCTCCCt UGGGAGGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-6883-5p tcagggaCCCTCCCt AGGGAGGG m7b Disrupted HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-6894-5p tcagggATCCTCCct AGGAGGAU m7b Created HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854
hsa-miR-7106-5p tcagggaTCCTCCCt UGGGAGGA m7b Created HHKTB_1526_NM_005441|1469|1508|49.9332841597534|1.77053286064854

Mutation Mutation ID Sample Name Cancer Type
chr21:g.36411591A>T COSM328772 P48 [lung][NS][carcinoma][non_small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181b-2-3p cacccTCAGTGAcat CUCACUGA m7b Disrupted HHFCT_98639_uc002yvj.1_3_6
hsa-miR-181b-3p cacccTCAGTGAcat CUCACUGA m7b Disrupted HHFCT_98639_uc002yvj.1_3_6
hsa-miR-4420 cacccTCAGTGACat GUCACUGA m8a Disrupted HHFCT_98639_uc002yvj.1_3_6
hsa-miR-6804-5p CACCCTCAgtgacat UGAGGGUG m8a Disrupted HHFCT_98639_uc002yvj.1_3_6
hsa-miR-181b-2-3p cacccTCAGTGAcat CUCACUGA m7b Disrupted HPRO6_50446_G59761.1_37783870
hsa-miR-181b-3p cacccTCAGTGAcat CUCACUGA m7b Disrupted HPRO6_50446_G59761.1_37783870
hsa-miR-4420 cacccTCAGTGACat GUCACUGA m8a Disrupted HPRO6_50446_G59761.1_37783870
hsa-miR-6804-5p CACCCTCAgtgacat UGAGGGUG m8a Disrupted HPRO6_50446_G59761.1_37783870

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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