SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0061628
Gene Symbol: CHAF1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.36387662G>A COSM1414001 KM12 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1272 cttgcTCATCATacc GAUGAUGA m7b Created HPTA1_7488_G10591.1_37759954
hsa-miR-1322 cttgctCATCATacc GAUGAUGC m6b Created HPTA1_7488_G10591.1_37759954
hsa-miR-4757-3p cttgctCGTCATacc CAUGACGU m6b Disrupted HPTA1_7488_G10591.1_37759954
hsa-miR-556-5p cttGCTCATCatacc GAUGAGCU m7a Created HPTA1_7488_G10591.1_37759954
hsa-miR-556-5p cttGCTCATCatacc GAUGAGCU m7a Created HPRO6_50444_G59759.1_37759955
hsa-miR-1272 cttgcTCATCATacc GAUGAUGA m7b Created HPTK7_4918_G7226.1_37759955
hsa-miR-1322 cttgctCATCATacc GAUGAUGC m6b Created HPTK7_4918_G7226.1_37759955
hsa-miR-4757-3p cttgctCGTCATacc CAUGACGU m6b Disrupted HPTK7_4918_G7226.1_37759955
hsa-miR-556-5p cttGCTCATCatacc GAUGAGCU m7a Created HPTK7_4918_G7226.1_37759955
hsa-miR-4757-3p cttgctCGTCATacc CAUGACGU m6b Disrupted HPRO6_50444_G59759.1_37759955
hsa-miR-1322 cttgctCATCATacc GAUGAUGC m6b Created HPRO6_50444_G59759.1_37759955
hsa-miR-1272 cttgcTCATCATacc GAUGAUGA m7b Created HPRO6_50444_G59759.1_37759955

Mutation Mutation ID Sample Name Cancer Type
chr21:g.36387661C>T COSM1030536 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-5p tcttgctTGTCATac AAUGACAC m6b Created HPRO6_50444_G59759.1_37759955
hsa-miR-4757-3p tcttgctCGTCATac CAUGACGU m6b Disrupted HPRO6_50444_G59759.1_37759955
hsa-miR-425-5p tcttgctTGTCATac AAUGACAC m6b Created HPTA1_7488_G10591.1_37759954
hsa-miR-4757-3p tcttgctCGTCATac CAUGACGU m6b Disrupted HPTA1_7488_G10591.1_37759954
hsa-miR-425-5p tcttgctTGTCATac AAUGACAC m6b Created HPTK7_4918_G7226.1_37759955
hsa-miR-4757-3p tcttgctCGTCATac CAUGACGU m6b Disrupted HPTK7_4918_G7226.1_37759955

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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