SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	hsa_circ_0048613
Gene Symbol:	CHAF1A
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr19:g.4443095T>A		COSN1082400	TCGA-D1-A15X-01	[endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr19:g.4443049T>C		COSN522718	TCGA-BH-A0W4-01	[breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-1179	tgtaGAATGCTTagg	AAGCAUUC	m8a	Disrupted	HHFCT_77781_uc002mal.1_13_72
hsa-miR-1179	tgtaGAATGCTTagg	AAGCAUUC	m8a	Disrupted	HHSJI_1358_Peak23808|35|0.2795|4|NM_005483|CHAF1A
hsa-miR-1179	tgtaGAATGCTTagg	AAGCAUUC	m8a	Disrupted	HHSJI_1359_Peak23808|35|0.2795|4|NM_005483|CHAF1A
hsa-miR-1179	tgtaGAATGCTTagg	AAGCAUUC	m8a	Disrupted	HHSJI_1360_Peak23808|35|0.2795|4|NM_005483|CHAF1A
hsa-miR-1179	tgtaGAATGCTTagg	AAGCAUUC	m8a	Disrupted	HHFCT_77781_uc002mal.1_13_72
hsa-miR-1179	tgtaGAATGCTTagg	AAGCAUUC	m8a	Disrupted	HHSJI_1358_Peak23808|35|0.2795|4|NM_005483|CHAF1A
hsa-miR-1179	tgtaGAATGCTTagg	AAGCAUUC	m8a	Disrupted	HHSJI_1359_Peak23808|35|0.2795|4|NM_005483|CHAF1A
hsa-miR-1179	tgtaGAATGCTTagg	AAGCAUUC	m8a	Disrupted	HHSJI_1360_Peak23808|35|0.2795|4|NM_005483|CHAF1A

Mutation		Mutation ID	Sample Name	Cancer Type
chr19:g.4433332G>A		COSM3289369	TCGA-MH-A561-01	[kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-3656	tgCACCCGCaggtgc	GGCGGGUG	m7b	(m7b->m6b)	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723
hsa-miR-3621	tgcACCCGCaggtgc	CGCGGGUC	m6b	Disrupted	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723
hsa-miR-134-3p	tgcaCCCACAGGtgc	CCUGUGGG	m8a	Created	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723
hsa-miR-6759-5p	tgcACCCACAggtgc	UUGUGGGU	m7b	Created	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723
hsa-miR-6748-5p	tgCACCCACAggtgc	UGUGGGUG	m8a	Created	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723
hsa-miR-6741-5p	tGCACCCACaggtgc	GUGGGUGC	m8a	(m7a->m8a)	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723
hsa-miR-4734	tgcaCCCGCAGgtgc	GCUGCGGG	m7b	Disrupted	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723

Mutation		Mutation ID	Sample Name	Cancer Type
chr19:g.4433329C>T		COSM3362903	TCGA-A3-3347-01	[kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-3621	acgtgcACCCGCagg	CGCGGGUC	m6b	Disrupted	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723
hsa-miR-3656	acgtgCACCCGCagg	GGCGGGUG	m7b	Disrupted	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723
hsa-miR-4734	acgtgcaCCCGCAGg	GCUGCGGG	m7b	Disrupted	HHKTB_1913_NM_005483|2539|2578|44.7534828983682|1.62153845683723

Mutation		Mutation ID	Sample Name	Cancer Type
chr19:g.4433130G>A		COSM4079007	TCGA-CG-4300-01	[stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-3690	atcaTCCAGGagttc	ACCUGGAC	m6b	Created	HHFCT_77779_uc002mal.1_11_13
hsa-miR-4254	atcaTCCAGGagttc	GCCUGGAG	m6b	Created	HHFCT_77779_uc002mal.1_11_13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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