SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0048608
Gene Symbol: CHAF1A
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409680G>A COSM3289110 RKO [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-5p tcCACCAGCTcgccc AGCUGGUG m8a Disrupted HHFCT_77774_uc002mal.1_6_12
hsa-miR-4456 tCCACCAGctcgccc CCUGGUGG m7b Disrupted HHFCT_77774_uc002mal.1_6_12
hsa-miR-4487 tccaCCAGCTCgccc AGAGCUGG m7b Disrupted HHFCT_77774_uc002mal.1_6_12
hsa-miR-571 tccaCCAACTCgccc UGAGUUGG m7b Created HHFCT_77774_uc002mal.1_6_12
hsa-miR-138-5p tcCACCAGCTcgccc AGCUGGUG m8a Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-4456 tCCACCAGctcgccc CCUGGUGG m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-4487 tccaCCAGCTCgccc AGAGCUGG m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-571 tccaCCAACTCgccc UGAGUUGG m7b Created HHFKP_71889_uc002mal.1_7_106

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409668C>T COSM3535289 TCGA-HU-A4GN-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4419a agctCTCCCTCttcc UGAGGGAG m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-4510 agctCTCCCTCttcc UGAGGGAG m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-6127 agctCTCCCTCttcc UGAGGGAG m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-6129 agctCTCCCTCttcc UGAGGGAG m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-6130 agctCTCCCTCttcc UGAGGGAG m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-6133 agctCTCCCTCttcc UGAGGGAG m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-6731-5p agCTCTCCCtcttcc UGGGAGAG m7b (m7b->m6b) HHFKP_71889_uc002mal.1_7_106
hsa-miR-6760-5p agcTCTCCCTcttcc CAGGGAGA m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-6873-5p agctcTCCCTCTtcc CAGAGGGA m7b Disrupted HHFKP_71889_uc002mal.1_7_106
hsa-miR-8085 agCTCTCCCtcttcc UGGGAGAG m7b (m7b->m6b) HHFKP_71889_uc002mal.1_7_106

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409625C>T COSM3892782 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3153 atCTTTCCCCgaaga GGGGAAAG m8a Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-5091 atcttTCTCCGaaga ACGGAGAC m6b Created HHFCT_77773_uc002mal.1_4_13
hsa-miR-542-5p atcttTCCCCGAaga UCGGGGAU m7a Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-5739 atcttTCTCCGaaga GCGGAGAG m6b Created HHFCT_77773_uc002mal.1_4_13
hsa-miR-6727-5p atctttCCCCGAaga CUCGGGGC m6b Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-6733-5p atCTTTCCCcgaaga UGGGAAAG m7b (m7b->m6b) HHFCT_77773_uc002mal.1_4_13
hsa-miR-6739-5p atCTTTCCCcgaaga UGGGAAAG m7b (m7b->m6b) HHFCT_77773_uc002mal.1_4_13
hsa-miR-6777-5p atcttTCCCCGaaga ACGGGGAG m6b Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-6889-5p atcttTCCCCGAaga UCGGGGAG m7a Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-3153 atCTTTCCCCgaaga GGGGAAAG m8a Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-5091 atcttTCTCCGaaga ACGGAGAC m6b Created HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-542-5p atcttTCCCCGAaga UCGGGGAU m7a Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-5739 atcttTCTCCGaaga GCGGAGAG m6b Created HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6727-5p atctttCCCCGAaga CUCGGGGC m6b Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6733-5p atCTTTCCCcgaaga UGGGAAAG m7b (m7b->m6b) HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6739-5p atCTTTCCCcgaaga UGGGAAAG m7b (m7b->m6b) HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6777-5p atcttTCCCCGaaga ACGGGGAG m6b Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6889-5p atcttTCCCCGAaga UCGGGGAG m7a Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-3153 atCTTTCCCCgaaga GGGGAAAG m8a Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-5091 atcttTCTCCGaaga ACGGAGAC m6b Created HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-542-5p atcttTCCCCGAaga UCGGGGAU m7a Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-5739 atcttTCTCCGaaga GCGGAGAG m6b Created HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6727-5p atctttCCCCGAaga CUCGGGGC m6b Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6733-5p atCTTTCCCcgaaga UGGGAAAG m7b (m7b->m6b) HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6739-5p atCTTTCCCcgaaga UGGGAAAG m7b (m7b->m6b) HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6777-5p atcttTCCCCGaaga ACGGGGAG m6b Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6889-5p atcttTCCCCGAaga UCGGGGAG m7a Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409610G>T COSM1189775 LC_S15 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-3p gagtgaGGTGCTGga UCAGCACC m7b Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-3680-5p gAGTGAGTtgctgga GACUCACU m7b Created HHFCT_77773_uc002mal.1_4_13
hsa-miR-6750-3p gaGTGAGTTgctgga GAACUCAC m7b (m6b->m7b) HHFCT_77773_uc002mal.1_4_13
hsa-miR-3065-3p gagtgaGGTGCTGga UCAGCACC m7b Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-3680-5p gAGTGAGTtgctgga GACUCACU m7b Created HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6750-3p gaGTGAGTTgctgga GAACUCAC m7b (m6b->m7b) HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-3065-3p gagtgaGGTGCTGga UCAGCACC m7b Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-3680-5p gAGTGAGTtgctgga GACUCACU m7b Created HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6750-3p gaGTGAGTTgctgga GAACUCAC m7b (m6b->m7b) HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409601G>A COSM4439393 KYSE-450 [oesophagus][middle_third][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1266-5p gacCCCTGAGagtga CCUCAGGG m7b Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-4278 gaCCCCTAagagtga CUAGGGGG m6b Created HHFCT_77773_uc002mal.1_4_13
hsa-miR-4518 gacCCCTGAGagtga GCUCAGGG m7b Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-4639-3p gacccctGAGAGTGa UCACUCUC m7b Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-6789-5p gaCCCCTAagagtga GUAGGGGC m6b Created HHFCT_77773_uc002mal.1_4_13
hsa-miR-6824-5p gaCCCCTAagagtga GUAGGGGA m6b Created HHFCT_77773_uc002mal.1_4_13
hsa-miR-1266-5p gacCCCTGAGagtga CCUCAGGG m7b Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-4278 gaCCCCTAagagtga CUAGGGGG m6b Created HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-4518 gacCCCTGAGagtga GCUCAGGG m7b Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-4639-3p gacccctGAGAGTGa UCACUCUC m7b Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6789-5p gaCCCCTAagagtga GUAGGGGC m6b Created HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6824-5p gaCCCCTAagagtga GUAGGGGA m6b Created HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-1266-5p gacCCCTGAGagtga CCUCAGGG m7b Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-4278 gaCCCCTAagagtga CUAGGGGG m6b Created HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-4518 gacCCCTGAGagtga GCUCAGGG m7b Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-4639-3p gacccctGAGAGTGa UCACUCUC m7b Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6789-5p gaCCCCTAagagtga GUAGGGGC m6b Created HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-6824-5p gaCCCCTAagagtga GUAGGGGA m6b Created HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409592A>T COSM1727037 261T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p caAGAACTTgacccc AAAGUUCU m7b (m6b->m7b) HHFCT_77773_uc002mal.1_4_13
hsa-miR-4677-5p cAAGAACAtgacccc UUGUUCUU m7b Disrupted HHFCT_77773_uc002mal.1_4_13
hsa-miR-5584-3p cAAGAACTtgacccc UAGUUCUU m7b Created HHFCT_77773_uc002mal.1_4_13
hsa-miR-148a-5p caAGAACTTgacccc AAAGUUCU m7b (m6b->m7b) HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-4677-5p cAAGAACAtgacccc UUGUUCUU m7b Disrupted HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-5584-3p cAAGAACTtgacccc UAGUUCUU m7b Created HHHNA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-148a-5p caAGAACTTgacccc AAAGUUCU m7b (m6b->m7b) HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-4677-5p cAAGAACAtgacccc UUGUUCUU m7b Disrupted HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957
hsa-miR-5584-3p cAAGAACTtgacccc UAGUUCUU m7b Created HHHSA_11688_CHAF1A|NM_005483|exon_CDS|-5.98043707474114|0.0763005130243957

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409338C>T COSM4499291 CSCC-49-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p gacATTCTTTGcaaa CAAAGAAU m8a Created HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-206 gACATTCCttgcaaa UGGAAUGU m7b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-4708-3p gacattCCTTGCaaa AGCAAGGC m6b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-518a-5p gacattCTTTGCAaa CUGCAAAG m7b Created HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-527 gacattCTTTGCAaa CUGCAAAG m7b Created HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-548aw gacattcTTTGCAaa GUGCAAAA m6b Created HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-613 gACATTCCTtgcaaa AGGAAUGU m8a (m8a->m7a) HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-6830-5p gacaTTCCTTGcaaa CCAAGGAA m7b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-1-3p gACATTCCttgcaaa UGGAAUGU m7b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-186-5p gacATTCTTTGcaaa CAAAGAAU m8a Created HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-206 gACATTCCttgcaaa UGGAAUGU m7b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-4708-3p gacattCCTTGCaaa AGCAAGGC m6b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-518a-5p gacattCTTTGCAaa CUGCAAAG m7b Created HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-527 gacattCTTTGCAaa CUGCAAAG m7b Created HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-548aw gacattcTTTGCAaa GUGCAAAA m6b Created HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-613 gACATTCCTtgcaaa AGGAAUGU m8a (m8a->m7a) HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-6830-5p gacaTTCCTTGcaaa CCAAGGAA m7b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409325C>G COSM474844 TCGA-B0-5106-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1182 agAGACCCTttcaga GAGGGUCU m7b (m7b->m6b) HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-4766-5p agagaccCTTTCAGa UCUGAAAG m7b Disrupted HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-488-3p agagacCCTTTCAga UUGAAAGG m7b Disrupted HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-553 agagACCGTTTcaga AAAACGGU m7b Created HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-5681a agagaCCCTTTCaga AGAAAGGG m7b Disrupted HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-6730-5p agagacCCTTTCaga AGAAAGGU m6b Disrupted HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-1182 agAGACCCTttcaga GAGGGUCU m7b (m7b->m6b) HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-4766-5p agagaccCTTTCAGa UCUGAAAG m7b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-488-3p agagacCCTTTCAga UUGAAAGG m7b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-553 agagACCGTTTcaga AAAACGGU m7b Created HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-5681a agagaCCCTTTCaga AGAAAGGG m7b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-6730-5p agagacCCTTTCaga AGAAAGGU m6b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-1182 agAGACCCTttcaga GAGGGUCU m7b (m7b->m6b) HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-4766-5p agagaccCTTTCAGa UCUGAAAG m7b Disrupted HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-488-3p agagacCCTTTCAga UUGAAAGG m7b Disrupted HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-553 agagACCGTTTcaga AAAACGGU m7b Created HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-5681a agagaCCCTTTCaga AGAAAGGG m7b Disrupted HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-6730-5p agagacCCTTTCaga AGAAAGGU m6b Disrupted HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-1182 agAGACCCTttcaga GAGGGUCU m7b (m7b->m6b) HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-4766-5p agagaccCTTTCAGa UCUGAAAG m7b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-488-3p agagacCCTTTCAga UUGAAAGG m7b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-553 agagACCGTTTcaga AAAACGGU m7b Created HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-5681a agagaCCCTTTCaga AGAAAGGG m7b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-6730-5p agagacCCTTTCaga AGAAAGGU m6b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409321G>A COSM3823315 TCGA-D8-A1JA-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-515-5p cTGGAGAAacccttt UUCUCCAA m7a Created HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-519e-5p cTGGAGAAacccttt UUCUCCAA m7a Created HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-629-3p ctGGAGAAacccttt GUUCUCCC m6b Created HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-6845-3p ctGGAGAGacccttt CCUCUCCU m6b Disrupted HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-6895-3p ctgGAGAGACccttt UGUCUCUC m7b Disrupted HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-1182 ctggagAGACCCTtt GAGGGUCU m7b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-515-5p cTGGAGAAacccttt UUCUCCAA m7a Created HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-519e-5p cTGGAGAAacccttt UUCUCCAA m7a Created HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-629-3p ctGGAGAAacccttt GUUCUCCC m6b Created HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-6845-3p ctGGAGAGacccttt CCUCUCCU m6b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-6895-3p ctgGAGAGACccttt UGUCUCUC m7b Disrupted HHHSE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-1182 ctggagAGACCCTtt GAGGGUCU m7b Disrupted HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-515-5p cTGGAGAAacccttt UUCUCCAA m7a Created HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-519e-5p cTGGAGAAacccttt UUCUCCAA m7a Created HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-629-3p ctGGAGAAacccttt GUUCUCCC m6b Created HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-6845-3p ctGGAGAGacccttt CCUCUCCU m6b Disrupted HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-6895-3p ctgGAGAGACccttt UGUCUCUC m7b Disrupted HHHNE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503
hsa-miR-1182 ctggagAGACCCTtt GAGGGUCU m7b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-515-5p cTGGAGAAacccttt UUCUCCAA m7a Created HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-519e-5p cTGGAGAAacccttt UUCUCCAA m7a Created HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-629-3p ctGGAGAAacccttt GUUCUCCC m6b Created HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-6845-3p ctGGAGAGacccttt CCUCUCCU m6b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-6895-3p ctgGAGAGACccttt UGUCUCUC m7b Disrupted HHHNE_3682_CHAF1A|NM_005483|exon_CDS|-6.53306107721972|-1.83289907563116
hsa-miR-1182 ctggagAGACCCTtt GAGGGUCU m7b Disrupted HHHSE_3681_CHAF1A|NM_005483|exon_CDS|-6.54105459345278|-1.81691204316503

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409308C>T COSM997643 TCGA-DI-A0WH-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5093 aagttggCATTTCCt AGGAAAUG m7b Disrupted HHFCT_77772_uc002mal.1_3_10

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409231G>T COSM1393370 TCGA-F4-6703-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1304-3p cctcCAGTGAGgcaa UCUCACUG m7b Created HHFCT_77771_uc002mal.1_2_13
hsa-miR-4292 cctCCAGGGaggcaa CCCCUGGG m6b Disrupted HHFCT_77771_uc002mal.1_2_13
hsa-miR-4308 ccTCCAGGGAggcaa UCCCUGGA m8a Disrupted HHFCT_77771_uc002mal.1_2_13
hsa-miR-653-3p cctCCAGTGAggcaa UUCACUGG m7b Created HHFCT_77771_uc002mal.1_2_13
hsa-miR-6778-3p cctccaGGGAGGCAa UGCCUCCC m8a Disrupted HHFCT_77771_uc002mal.1_2_13
hsa-miR-6791-3p cctccagGGAGGCAa UGCCUCCU m7a Disrupted HHFCT_77771_uc002mal.1_2_13
hsa-miR-6791-5p cctCCAGGGaggcaa CCCCUGGG m6b Disrupted HHFCT_77771_uc002mal.1_2_13
hsa-miR-6829-3p cctccagGGAGGCAa UGCCUCCU m7a Disrupted HHFCT_77771_uc002mal.1_2_13
hsa-miR-6836-3p cctccagGGAGGCAa AUGCCUCC m7b Disrupted HHFCT_77771_uc002mal.1_2_13
hsa-miR-7113-3p cctcCAGGGAGGcaa CCUCCCUG m8a Disrupted HHFCT_77771_uc002mal.1_2_13

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409180A>G COSM3960176 3844_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1231 agcagCCAGACAgtc GUGUCUGG m7b Disrupted HHFKP_71887_uc002mal.1_5_13
hsa-miR-3064-5p agCAGCCAGAcagtc UCUGGCUG m8a Disrupted HHFKP_71887_uc002mal.1_5_13
hsa-miR-3120-5p agcagcCAGACAGtc CCUGUCUG m7b Disrupted HHFKP_71887_uc002mal.1_5_13
hsa-miR-647 aGCAGCCAgacagtc GUGGCUGC m7b Disrupted HHFKP_71887_uc002mal.1_5_13
hsa-miR-6504-5p agCAGCCAGAcagtc UCUGGCUG m8a Disrupted HHFKP_71887_uc002mal.1_5_13
hsa-miR-664a-5p agcAGCCAGacagtc ACUGGCUA m6b Disrupted HHFKP_71887_uc002mal.1_5_13
hsa-miR-6762-3p AGCAGCCAgacagtc UGGCUGCU m8a Disrupted HHFKP_71887_uc002mal.1_5_13

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409163G>C COSM4131988 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3909 gacAGAGGACtcgaa UGUCCUCU m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-5691 gaCAGAGCActcgaa UUGCUCUG m7b (m6b->m7b) HHFCT_77770_uc002mal.1_1_37
hsa-miR-6780a-3p gaCAGAGGActcgaa CUCCUCUG m7b (m7b->m6b) HHFCT_77770_uc002mal.1_1_37
hsa-miR-6805-3p gaCAGAGCActcgaa UUGCUCUG m7b (m6b->m7b) HHFCT_77770_uc002mal.1_1_37
hsa-miR-6852-3p gacAGAGGACtcgaa UGUCCUCU m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-3909 gacAGAGGACtcgaa UGUCCUCU m7b Disrupted HHFKP_71886_uc002mal.1_4_486
hsa-miR-5691 gaCAGAGCActcgaa UUGCUCUG m7b (m6b->m7b) HHFKP_71886_uc002mal.1_4_486
hsa-miR-6780a-3p gaCAGAGGActcgaa CUCCUCUG m7b (m7b->m6b) HHFKP_71886_uc002mal.1_4_486
hsa-miR-6805-3p gaCAGAGCActcgaa UUGCUCUG m7b (m6b->m7b) HHFKP_71886_uc002mal.1_4_486
hsa-miR-6852-3p gacAGAGGACtcgaa UGUCCUCU m7b Disrupted HHFKP_71886_uc002mal.1_4_486

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409160G>A COSM1393369 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3909 tttgacAGAGGACtc UGUCCUCU m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-6780a-3p tttgaCAGAGGActc CUCCUCUG m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-6852-3p tttgacAGAGGACtc UGUCCUCU m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-3909 tttgacAGAGGACtc UGUCCUCU m7b Disrupted HHFKP_71886_uc002mal.1_4_486
hsa-miR-6780a-3p tttgaCAGAGGActc CUCCUCUG m7b Disrupted HHFKP_71886_uc002mal.1_4_486
hsa-miR-6852-3p tttgacAGAGGACtc UGUCCUCU m7b Disrupted HHFKP_71886_uc002mal.1_4_486

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409145A>G COSM4671908 T1154 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1272 cacagTCATCATtga GAUGAUGA m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-943 cACAGTCAtcattga CUGACUGU m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-1272 cacagTCATCATtga GAUGAUGA m7b Disrupted HHFKP_71886_uc002mal.1_4_486
hsa-miR-943 cACAGTCAtcattga CUGACUGU m7b Disrupted HHFKP_71886_uc002mal.1_4_486

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409118G>A COSM177330 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2052 tagaaTCAAAACcag UGUUUUGA m7b Created HHFCT_77770_uc002mal.1_1_37
hsa-miR-29b-2-5p tagaatcGAAACCAg CUGGUUUC m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-2052 tagaaTCAAAACcag UGUUUUGA m7b Created HHFKP_71886_uc002mal.1_4_486
hsa-miR-29b-2-5p tagaatcGAAACCAg CUGGUUUC m7b Disrupted HHFKP_71886_uc002mal.1_4_486

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409117C>T COSM3422892 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5571-5p atAGAATTGaaacca CAAUUCUC m7a (m6a->m7a) HHFCT_77770_uc002mal.1_1_37
hsa-miR-5571-5p atAGAATTGaaacca CAAUUCUC m7a (m6a->m7a) HHFKP_71886_uc002mal.1_4_486

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409113G>A COSM4429913 403 [oesophagus][lower_third][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-2-3p aGAAATAGaatcgaa GCUAUUUC m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-4482-3p agaAATAGAAtcgaa UUUCUAUU m7b Disrupted HHFCT_77770_uc002mal.1_1_37

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409110A>G COSM4778358 RK261_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-1-3p ttaaGAAGTAGaatc GCUACUUC m7b Created HHFCT_77770_uc002mal.1_1_37
hsa-miR-138-2-3p ttaaGAAATAGaatc GCUAUUUC m7b Disrupted HHFCT_77770_uc002mal.1_1_37
hsa-miR-3682-5p ttaAGAAGTAGaatc CUACUUCU m8a Created HHFCT_77770_uc002mal.1_1_37
hsa-miR-4482-3p ttaagaAATAGAAtc UUUCUAUU m7b Disrupted HHFCT_77770_uc002mal.1_1_37

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4409036T>C COSM997642 TCGA-BS-A0UJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34c-5p acaACTGCCatgtgg AGGCAGUG m6b Created HHKTA_46156_NM_005483|313|352|1.55764587786326|1.62153845683723
hsa-miR-449b-5p acaACTGCCatgtgg AGGCAGUG m6b Created HHKTA_46156_NM_005483|313|352|1.55764587786326|1.62153845683723
hsa-miR-4645-3p acaACTGTCatgtgg AGACAGUA m6b Disrupted HHKTA_46156_NM_005483|313|352|1.55764587786326|1.62153845683723
hsa-miR-4717-3p acaactgCCATGTGg ACACAUGG m7b Created HHKTA_46156_NM_005483|313|352|1.55764587786326|1.62153845683723
hsa-miR-548au-3p acAACTGCCAtgtgg UGGCAGUU m8a Created HHKTA_46156_NM_005483|313|352|1.55764587786326|1.62153845683723
hsa-miR-942-3p acaactGCCATGTGg CACAUGGC m8a Created HHKTA_46156_NM_005483|313|352|1.55764587786326|1.62153845683723

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4408978C>T COSM1304703 TCGA-G2-A2EO-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548av-5p gGTACTTTTgtgcaa AAAAGUAC m8a (m7a->m8a) HPKMB_3930_G4473.1_4408960
hsa-miR-548k gGTACTTTTgtgcaa AAAAGUAC m8a (m7a->m8a) HPKMB_3930_G4473.1_4408960
hsa-miR-548n ggTACTTTTGtgcaa CAAAAGUA m8a Created HPKMB_3930_G4473.1_4408960
hsa-miR-5585-5p gGTACTTCtgtgcaa UGAAGUAC m7b Disrupted HPKMB_3930_G4473.1_4408960
hsa-miR-548av-5p gGTACTTTTgtgcaa AAAAGUAC m8a (m7a->m8a) HPRO6_37132_G43986.1_4408963
hsa-miR-548k gGTACTTTTgtgcaa AAAAGUAC m8a (m7a->m8a) HPRO6_37132_G43986.1_4408963
hsa-miR-548n ggTACTTTTGtgcaa CAAAAGUA m8a Created HPRO6_37132_G43986.1_4408963
hsa-miR-5585-5p gGTACTTCtgtgcaa UGAAGUAC m7b Disrupted HPRO6_37132_G43986.1_4408963
Mutation Mutation ID Sample Name Cancer Type
chr19:g.4408965G>T COSM474843 TCGA-A3-3373-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr19:g.4408965G>A COSM1393367 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1231 gtCAGACAatcaggg GUGUCUGG m6b Created HHFKP_71885_uc002mal.1_3_12
hsa-miR-219a-5p gtcaGACAATCAggg UGAUUGUC m8a Created HHFKP_71885_uc002mal.1_3_12
hsa-miR-4445-5p gtcagACAATCaggg AGAUUGUU m6b Created HHFKP_71885_uc002mal.1_3_12
hsa-miR-4782-3p gtcaGACAATCAggg UGAUUGUC m8a Created HHFKP_71885_uc002mal.1_3_12
hsa-miR-632 gtCAGACAatcaggg GUGUCUGC m6b Created HHFKP_71885_uc002mal.1_3_12
hsa-miR-6766-3p gtcaGACAATCAggg UGAUUGUC m8a Created HHFKP_71885_uc002mal.1_3_12
hsa-miR-1231 gtCAGACAatcaggg GUGUCUGG m6b Created HPKMB_3930_G4473.1_4408960
hsa-miR-219a-5p gtcaGACAATCAggg UGAUUGUC m8a Created HPKMB_3930_G4473.1_4408960
hsa-miR-4445-5p gtcagACAATCaggg AGAUUGUU m6b Created HPKMB_3930_G4473.1_4408960
hsa-miR-4782-3p gtcaGACAATCAggg UGAUUGUC m8a Created HPKMB_3930_G4473.1_4408960
hsa-miR-632 gtCAGACAatcaggg GUGUCUGC m6b Created HPKMB_3930_G4473.1_4408960
hsa-miR-6766-3p gtcaGACAATCAggg UGAUUGUC m8a Created HPKMB_3930_G4473.1_4408960
hsa-miR-1231 gtCAGACAatcaggg GUGUCUGG m6b Created HPRO6_37132_G43986.1_4408963
hsa-miR-219a-5p gtcaGACAATCAggg UGAUUGUC m8a Created HPRO6_37132_G43986.1_4408963
hsa-miR-4445-5p gtcagACAATCaggg AGAUUGUU m6b Created HPRO6_37132_G43986.1_4408963
hsa-miR-4782-3p gtcaGACAATCAggg UGAUUGUC m8a Created HPRO6_37132_G43986.1_4408963
hsa-miR-632 gtCAGACAatcaggg GUGUCUGC m6b Created HPRO6_37132_G43986.1_4408963
hsa-miR-6766-3p gtcaGACAATCAggg UGAUUGUC m8a Created HPRO6_37132_G43986.1_4408963

Mutation Mutation ID Sample Name Cancer Type
chr19:g.4408949C>T COSM4915737 TCGA-DD-A1EF-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3617-3p ggaaaGCTGATGaca CAUCAGCA m7a Created HHFKP_71885_uc002mal.1_3_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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