SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0008376
Gene Symbol: CDKAL1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.20574386G>A COSN7788813 ASHPC_0029_Pa_P [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-885-5p ctattaTAATGGAag UCCAUUAC m7a Created HHFKP_126040_cluster-19031_5_25
hsa-miR-6884-3p ctattaTGATGGaag CCCAUCAC m6b Disrupted HHFKP_126040_cluster-19031_5_25
hsa-miR-4528 ctatTATAATGgaag UCAUUAUA m7b Created HHFKP_126040_cluster-19031_5_25
hsa-miR-374b-5p cTATTATAatggaag AUAUAAUA m7b Created HHFKP_126040_cluster-19031_5_25
hsa-miR-374a-5p cTATTATAAtggaag UUAUAAUA m8a (m7a->m8a) HHFKP_126040_cluster-19031_5_25

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser