SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_017774
Gene Symbol: CDKAL1
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20638260A>T COSN9311971 8051731 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.20600165C>G COSN9776632 AOCS-160-1-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-585-5p cattaaTGTGCTAct CUAGCACA m7b Created HPKTA_51535_G55704.1_20600392
Mutation Mutation ID Sample Name Cancer Type
chr6:g.20567231C>A COSN8796316 SS6003111 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.20542706T>C COSN4954635 SS6003305 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3674 aCTACAATacaatac AUUGUAGA m7a Disrupted HHFCT_137157_cluster-19031_3_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20534905C>T COSN9776615 AOCS-076-1-3 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1298-3p tagctttCCCAGATc CAUCUGGG m7b Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-1299 tagcttTTCCAGAtc UUCUGGAA m7b Created HHFCT_137155_cluster-19031_1_8
hsa-miR-204-3p tagctTTCCCAGatc GCUGGGAA m7b Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-3153 tagCTTTCCCagatc GGGGAAAG m7b Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-4314 tagcttTCCCAGAtc CUCUGGGA m7b Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-4646-5p tagctTTCCCAGatc ACUGGGAA m7b Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-6124 tagCTTTTCCagatc GGGAAAAG m7b Created HHFCT_137155_cluster-19031_1_8
hsa-miR-6128 tagcttTTCCAGatc ACUGGAAU m6b Created HHFCT_137155_cluster-19031_1_8
hsa-miR-619-5p tagcttTCCCAGatc GCUGGGAU m6b Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-6506-5p tagcttTCCCAGatc ACUGGGAU m6b Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-6733-5p tagCTTTCCCAgatc UGGGAAAG m8a Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-6739-5p tagCTTTCCCAgatc UGGGAAAG m8a Disrupted HHFCT_137155_cluster-19031_1_8
hsa-miR-875-3p tagctTTTCCAGatc CCUGGAAA m7b Created HHFCT_137155_cluster-19031_1_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.20534537T>C COSN5627423 RK156_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3123 gttgATTCTCTcact CAGAGAAU m7b Created HPCB3_19493_G26754.1_20534778
hsa-miR-539-5p gttgatTTTCTCact GGAGAAAU m6b Disrupted HPCB3_19493_G26754.1_20534778
hsa-miR-551b-5p gTTGATTTtctcact GAAAUCAA m7b Disrupted HPCB3_19493_G26754.1_20534778

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser