SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001786
Gene Symbol: CDK1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.60793927G>A COSM427740 TCGA-B6-A0RV-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4671-3p tgGCACTAAatcatc UUAGUGCA m7a (m6a->m7a) HPKMB_1048_G1161.1_62553673
hsa-miR-4276 tggCACTGAatcatc CUCAGUGA m6b Disrupted HPKMB_1048_G1161.1_62553673
hsa-miR-148a-3p tgGCACTGAatcatc UCAGUGCA m7a (m7a->m6a) HPKMB_1048_G1161.1_62553673
hsa-miR-33b-3p tGGCACTGaatcatc CAGUGCCU m7a Disrupted HPKMB_1048_G1161.1_62553673
hsa-miR-152-3p tgGCACTGAatcatc UCAGUGCA m7a (m7a->m6a) HPKMB_1048_G1161.1_62553673
hsa-miR-148b-3p tgGCACTGAatcatc UCAGUGCA m7a (m7a->m6a) HPKMB_1048_G1161.1_62553673

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser