SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001252339
Gene Symbol: CDH4
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.61626409G>A COSN6561088 ICGC_MB61 [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8057 ggctcatGAGCCAag GUGGCUCU m6b Disrupted HPTA4_2419_G10749.1_60201457
hsa-miR-6847-3p ggctCATGAGCCaag GGCUCAUG m8a Disrupted HPTA4_2419_G10749.1_60201457
hsa-miR-4284 ggctcaTGAGCCaag GGGCUCAC m6b Disrupted HPTA4_2419_G10749.1_60201457
hsa-miR-24-3p ggctcaTGAGCCAag UGGCUCAG m7a Disrupted HPTA4_2419_G10749.1_60201457

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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