SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0040645
Gene Symbol: CDH13
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678304A>T COSM3957874 J65_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-28-5p cAGCTCCTcagccac AAGGAGCU m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-3139 cAGCTCCTcagccac UAGGAGCU m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4689 cagCTCCTCAgccac UUGAGGAG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6858-5p cagCTCCTCAgccac GUGAGGAG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6874-5p cAGCTCCAcagccac AUGGAGCU m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-708-5p cAGCTCCTcagccac AAGGAGCU m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-7114-5p cagcTCCACAGccac UCUGUGGA m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-7160-5p cagctCCTCAGCcac UGCUGAGG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-7847-3p cagCTCCACagccac CGUGGAGG m6b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-7974 cagctcCACAGCCac AGGCUGUG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-8077 cagctcCTCAGCCac GGCUGAGU m7a Created HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678301T>C COSM1563466 TCGA-AG-3885-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p ccccaGCCCCACagc GUGGGGCC m7a Created HHFKP_57245_cluster-8746_61_10
hsa-miR-134-3p ccccagcCCCACAGc CCUGUGGG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-185-3p cccCAGCCCCacagc AGGGGCUG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-3151-5p ccccaGCCCCACagc GGUGGGGC m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4447 ccccagCCCCACagc GGUGGGGG m6b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4472 ccccagCCCCACagc GGUGGGGG m6b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4487 ccCCAGCTCcacagc AGAGCUGG m7b (m7b->m6b) HHFKP_57245_cluster-8746_61_10
hsa-miR-4492 ccCCAGCCCCacagc GGGGCUGG m8a Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4498 ccCCAGCCCcacagc UGGGCUGG m7b (m6b->m7b) HHFKP_57245_cluster-8746_61_10
hsa-miR-4505 cCCCAGCCccacagc AGGCUGGG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4633-3p ccccAGCTCCacagc AGGAGCUA m6b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-4675 cccCAGCCCCacagc GGGGCUGU m7a Created HHFKP_57245_cluster-8746_61_10
hsa-miR-491-5p ccccagCCCCACagc AGUGGGGA m6b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-5001-5p ccCCAGCCCcacagc AGGGCUGG m7b (m6b->m7b) HHFKP_57245_cluster-8746_61_10
hsa-miR-5787 cCCCAGCCCcacagc GGGCUGGG m8a (m7a->m8a) HHFKP_57245_cluster-8746_61_10
hsa-miR-6500-5p ccccAGCTCCacagc AGGAGCUA m6b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-6742-5p ccccagCCCCACagc AGUGGGGU m6b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6796-5p ccccagCCCCACAgc UUGUGGGG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6874-5p ccccAGCTCCAcagc AUGGAGCU m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-7114-5p ccccagcTCCACAGc UCUGUGGA m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-762 ccCCAGCCCCacagc GGGGCUGG m8a Created HHFKP_57245_cluster-8746_61_10
hsa-miR-7847-3p ccccagCTCCACagc CGUGGAGG m6b Disrupted HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678292G>T COSM559198 TCGA-50-5933-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p ctcctacGGCCCCAg GUGGGGCC m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-128-1-5p ctcctaCGGCCCCag CGGGGCCG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-128-2-5p ctcctaCGGCCCCag GGGGGCCG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-486-3p ctcctaCTGCCCCag CGGGGCAG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6762-5p ctcctacGGCCCCag CGGGGCCA m6b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-6845-5p ctcctacGGCCCCag CGGGGCCA m6b Disrupted HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678292G>A COSM2693888 TCGA-HU-A4GT-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p ctcctacGGCCCCAg GUGGGGCC m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-128-1-5p ctcctaCGGCCCCag CGGGGCCG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-128-2-5p ctcctaCGGCCCCag GGGGGCCG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-185-3p ctcctaCAGCCCCag AGGGGCUG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4492 ctcctaCAGCCCCag GGGGCUGG m7a Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4675 ctcctACAGCCCCag GGGGCUGU m8a Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4741 ctcctACAGCCCcag CGGGCUGU m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6762-5p ctcctacGGCCCCag CGGGGCCA m6b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-6845-5p ctcctacGGCCCCag CGGGGCCA m6b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-762 ctcctaCAGCCCCag GGGGCUGG m7a Created HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678291C>T COSM4976894 1N53-VS-1T53 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-128-1-5p tctcctaCGGCCCCa CGGGGCCG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-128-2-5p tctcctaCGGCCCCa GGGGGCCG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-6508-3p tctcctATGGCCCca UGGGCCAU m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6762-5p tctcctaTGGCCCCa CGGGGCCA m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6845-5p tctcctaTGGCCCCa CGGGGCCA m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-128-1-5p tctcctaCGGCCCCa CGGGGCCG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-128-2-5p tctcctaCGGCCCCa GGGGGCCG m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-6508-3p tctcctATGGCCCca UGGGCCAU m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6762-5p tctcctaTGGCCCCa CGGGGCCA m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6845-5p tctcctaTGGCCCCa CGGGGCCA m7b Created HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678289T>A COSM366805 LUAD-F00170 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6888-5p cgTCTCCTacggccc AAGGAGAU m6b Disrupted HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678274G>A COSM4758261 pfg212T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-5p cCCACTCAtacccga GUGAGUGG m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4745-5p CCCACTCAtacccga UGAGUGGG m8a Created HHFKP_57245_cluster-8746_61_10
hsa-miR-4758-5p cCCACTCAtacccga GUGAGUGG m7b Created HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678272T>C COSM1380135 TCGA-D5-5541-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4481 gaCCCACTCgtaccc GGAGUGGG m7b (m7b->m6b) HHFKP_57245_cluster-8746_61_10
hsa-miR-4745-5p gaCCCACTCgtaccc UGAGUGGG m7b (m7b->m6b) HHFKP_57245_cluster-8746_61_10
hsa-miR-6756-5p gaCCCACCCgtaccc AGGGUGGG m7b (m6b->m7b) HHFKP_57245_cluster-8746_61_10
hsa-miR-6766-5p gaCCCACCCGtaccc CGGGUGGG m8a Created HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678266A>G COSM974289 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-193a-5p aatgAAGACCCActc UGGGUCUU m8a Disrupted HHFCT_60305_cluster-8746_255_9
hsa-miR-205-5p aATGAAGGcccactc UCCUUCAU m7b Created HHFCT_60305_cluster-8746_255_9
hsa-miR-2861 aatgaAGGCCCactc GGGGCCUG m6b Created HHFCT_60305_cluster-8746_255_9
hsa-miR-193a-5p aatgAAGACCCActc UGGGUCUU m8a Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-205-5p aATGAAGGcccactc UCCUUCAU m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-2861 aatgaAGGCCCactc GGGGCCUG m6b Created HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678262G>A COSM4405611 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-153-5p ggAAAATGAagaccc UCAUUUUU m7a (m7a->m6a) HHFCT_60305_cluster-8746_255_9
hsa-miR-5696 ggaAAATGAagaccc CUCAUUUA m6b Disrupted HHFCT_60305_cluster-8746_255_9
hsa-miR-1250-3p gGAAAATGaagaccc ACAUUUUC m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-153-5p ggAAAATGAagaccc UCAUUUUU m7a (m7a->m6a) HHFKP_57245_cluster-8746_61_10
hsa-miR-5696 ggaAAATGAagaccc CUCAUUUA m6b Disrupted HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678256G>A COSM3512867 TCGA-EE-A181-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p caaagtgGAAAATGa ACAUUUUC m7b Disrupted HHFCT_60305_cluster-8746_255_9
hsa-miR-153-5p caaagtgAAAAATGa UCAUUUUU m7b Created HHFCT_60305_cluster-8746_255_9
hsa-miR-3692-3p caaaGTGGAAaatga GUUCCACA m6b Disrupted HHFCT_60305_cluster-8746_255_9
hsa-miR-4436b-5p caAAGTGGAaaatga GUCCACUU m7b (m7b->m6b) HHFCT_60305_cluster-8746_255_9
hsa-miR-5096 caaaGTGAAAaatga GUUUCACC m6b Created HHFCT_60305_cluster-8746_255_9
hsa-miR-6509-3p caaAGTGGAAaatga UUCCACUG m7a Disrupted HHFCT_60305_cluster-8746_255_9
hsa-miR-1250-3p caaagtgGAAAATGa ACAUUUUC m7b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-153-5p caaagtgAAAAATGa UCAUUUUU m7b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-3692-3p caaaGTGGAAaatga GUUCCACA m6b Disrupted HHFKP_57245_cluster-8746_61_10
hsa-miR-4436b-5p caAAGTGGAaaatga GUCCACUU m7b (m7b->m6b) HHFKP_57245_cluster-8746_61_10
hsa-miR-5096 caaaGTGAAAaatga GUUUCACC m6b Created HHFKP_57245_cluster-8746_61_10
hsa-miR-6509-3p caaAGTGGAAaatga UUCCACUG m7a Disrupted HHFKP_57245_cluster-8746_61_10

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678253GT>G COSM4670816 T263 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-204-5p gatcAAAGGGAAaat UUCCCUUU m8a Created HHFCT_60305_cluster-8746_255_9
hsa-miR-211-5p gatcAAAGGGAAaat UUCCCUUU m8a Created HHFCT_60305_cluster-8746_255_9
hsa-miR-3692-3p gatcaaaGTGGAAaat GUUCCACA m6b Disrupted HHFCT_60305_cluster-8746_255_9
hsa-miR-4436b-5p gatcaAAGTGGAaaat GUCCACUU m7b Disrupted HHFCT_60305_cluster-8746_255_9
hsa-miR-4446-5p gatcaaAGGGAAAat AUUUCCCU m7b Created HHFCT_60305_cluster-8746_255_9
hsa-miR-4755-5p gatcaAAGGGAAAat UUUCCCUU m8a Created HHFCT_60305_cluster-8746_255_9
hsa-miR-5006-3p gatcaAAGGGAAAat UUUCCCUU m8a Created HHFCT_60305_cluster-8746_255_9
hsa-miR-623 gatcaAAGGGAaaat AUCCCUUG m6b Created HHFCT_60305_cluster-8746_255_9
hsa-miR-6509-3p gatcaaAGTGGAAaat UUCCACUG m7a Disrupted HHFCT_60305_cluster-8746_255_9

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678251A>G COSM974288 TCGA-AP-A0LD-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3151-3p ctGATCAGagtggaa CCUGAUCC m6b Created HHFCT_60305_cluster-8746_255_9
hsa-miR-3192-3p ctGATCAGAGtggaa CUCUGAUC m8a Created HHFCT_60305_cluster-8746_255_9
hsa-miR-4436b-5p ctgatcaAAGTGGAa GUCCACUU m7b Disrupted HHFCT_60305_cluster-8746_255_9
hsa-miR-4714-5p ctgaTCAGAGTggaa AACUCUGA m7b Created HHFCT_60305_cluster-8746_255_9
hsa-miR-6777-3p ctgatcAGAGTGGAa UCCACUCU m8a Created HHFCT_60305_cluster-8746_255_9

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83678249C>T COSM3512866 TCGA-EE-A2MP-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4772-5p tgCTGATCAaagtgg UGAUCAGG m7a (m7a->m6a) HHFCT_60305_cluster-8746_255_9

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83614458A>T COSN9654004 C0072T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1199-5p tctGCTCAGatgctt CCUGAGCC m6b Disrupted HHFKP_57238_cluster-8746_54_8
hsa-miR-2278 tCTGCTCTgatgctt GAGAGCAG m7b Created HHFKP_57238_cluster-8746_54_8
hsa-miR-3200-5p tctgCTCAGATgctt AAUCUGAG m7b Disrupted HHFKP_57238_cluster-8746_54_8
hsa-miR-4303 tctGCTCAGAtgctt UUCUGAGC m7b Disrupted HHFKP_57238_cluster-8746_54_8
hsa-miR-4468 TCTGCTCTgatgctt AGAGCAGA m8a Created HHFKP_57238_cluster-8746_54_8
hsa-miR-4711-5p tctgctCTGATGCtt UGCAUCAG m7b Created HHFKP_57238_cluster-8746_54_8
hsa-miR-6501-3p tcTGCTCTGatgctt CCAGAGCA m7b (m6b->m7b) HHFKP_57238_cluster-8746_54_8
hsa-miR-6751-3p tctGCTCAGatgctt ACUGAGCC m6b Disrupted HHFKP_57238_cluster-8746_54_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83486586C>A COSM3378054 PCSI_0020_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3122 cTCCCAACatgttct GUUGGGAC m7a Disrupted HHFKP_57229_cluster-8746_45_38
hsa-miR-3147 ctCCCAACatgttct GGUUGGGC m6b Disrupted HHFKP_57229_cluster-8746_45_38
hsa-miR-4425 cTCCCAACAtgttct UGUUGGGA m8a (m8a->m7a) HHFKP_57229_cluster-8746_45_38
hsa-miR-4781-3p ctcCCAACATgttct AAUGUUGG m7b Disrupted HHFKP_57229_cluster-8746_45_38

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83486564C>T COSM50869 Mx22 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3186-5p cagcaGACGCCTGac CAGGCGUC m8a Disrupted HHFKP_57229_cluster-8746_45_38
hsa-miR-3937 cagcagaCGCCTGac ACAGGCGG m6b Disrupted HHFKP_57229_cluster-8746_45_38
hsa-miR-4269 cagcagaTGCCTGac GCAGGCAC m6b Created HHFKP_57229_cluster-8746_45_38
hsa-miR-4514 cagcagaTGCCTGac ACAGGCAG m6b Created HHFKP_57229_cluster-8746_45_38
hsa-miR-6715b-5p cagcagaTGCCTGac ACAGGCAC m6b Created HHFKP_57229_cluster-8746_45_38

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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