SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0040643
Gene Symbol: CDH13
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.83360537C>T COSN14540235 8068588 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-330-3p atgctgaTGCTTTGa GCAAAGCA m7b Created HHFCT_60276_cluster-8746_226_7
hsa-miR-3617-3p aTGCTGATGctttga CAUCAGCA m8a (m7a->m8a) HHFCT_60276_cluster-8746_226_7
hsa-miR-4422 atgctgATGCTTTga AAAAGCAU m7b Created HHFCT_60276_cluster-8746_226_7
hsa-miR-4711-5p atgCTGATGCtttga UGCAUCAG m7b Created HHFCT_60276_cluster-8746_226_7
hsa-miR-518b atgctgaCGCTTTGa CAAAGCGC m7a Disrupted HHFCT_60276_cluster-8746_226_7
hsa-miR-518c-3p atgctgaCGCTTTGa CAAAGCGC m7a Disrupted HHFCT_60276_cluster-8746_226_7
hsa-miR-518d-3p atgctgaCGCTTTGa CAAAGCGC m7a Disrupted HHFCT_60276_cluster-8746_226_7

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83319946G>C COSN7275691 8035823 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1322 acgttagGCATCATg GAUGAUGC m7b Disrupted HHFCT_60269_cluster-8746_219_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83266528A>G COSN1711223 RK189_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3161 tCTTATCAGgaaccc CUGAUAAG m8a (m8a->m7a) HHFCT_60264_cluster-8746_214_8
hsa-miR-378a-5p tcttaTCAGGAaccc CUCCUGAC m6b Disrupted HHFCT_60264_cluster-8746_214_8
hsa-miR-1200 tcttaTCAGGAaccc CUCCUGAG m6b Disrupted HHFCT_60264_cluster-8746_214_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83266241T>C COSN8673434 SS6003149 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3115 cacatACCCATATtt AUAUGGGU m8a Created HHFCT_60263_cluster-8746_213_6
hsa-miR-503-3p cacATACCCatattt GGGGUAUU m6b Created HHFCT_60263_cluster-8746_213_6
hsa-miR-5583-3p cacatacCCATATTt GAAUAUGG m7b Created HHFCT_60263_cluster-8746_213_6
hsa-miR-4517 cacatacTCATATTt AAAUAUGA m7b Disrupted HHFCT_60263_cluster-8746_213_6

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83262783A>G COSN6096822 RK028_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4727-5p cttTGGCAGATgttt AUCUGCCA m8a Disrupted HHFCT_60262_cluster-8746_212_8
hsa-miR-192-3p ctTTGGCAGatgttt CUGCCAAU m7a (m7a->m6a) HHFCT_60262_cluster-8746_212_8
hsa-miR-6084 cttTGGCGGAtgttt UUCCGCCA m7b Created HHFCT_60262_cluster-8746_212_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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