SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0040639
Gene Symbol: CDH13
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.83150102C>A COSN9653899 C0091T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-100-3p acagagaCAAGCTTa CAAGCUUG m7b Disrupted HPKTA_24720_G26642.1_83183709
hsa-miR-208a-5p acagagAAAAGCTta GAGCUUUU m7b Created HPKTA_24720_G26642.1_83183709
hsa-miR-208b-5p acagagAAAAGCTTa AAGCUUUU m8a Created HPKTA_24720_G26642.1_83183709
hsa-miR-4768-5p acAGAGAAaagctta AUUCUCUC m6b Created HPKTA_24720_G26642.1_83183709
hsa-miR-593-3p aCAGAGACAagctta UGUCUCUG m8a (m8a->m7a) HPKTA_24720_G26642.1_83183709
hsa-miR-627-3p acagAGAAAAGctta UCUUUUCU m7b Created HPKTA_24720_G26642.1_83183709
hsa-miR-6809-3p acAGAGAAaagctta CUUCUCUU m6b Created HPKTA_24720_G26642.1_83183709
hsa-miR-6818-3p acAGAGACAAgctta UUGUCUCU m8a Disrupted HPKTA_24720_G26642.1_83183709
hsa-miR-6833-3p acAGAGAAAagctta UUUCUCUC m7a (m6a->m7a) HPKTA_24720_G26642.1_83183709
hsa-miR-6895-3p acAGAGACAagctta UGUCUCUC m7a (m7a->m6a) HPKTA_24720_G26642.1_83183709

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83144055A>G COSN1191488 HX9T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4661-5p taagGCTAGTaacac AACUAGCU m6b Disrupted HHFCT_60238_cluster-8746_188_8
hsa-miR-634 taagGCTGGTaacac AACCAGCA m6b Created HHFCT_60238_cluster-8746_188_8
hsa-miR-6849-3p taAGGCTGGTaacac ACCAGCCU m8a Created HHFCT_60238_cluster-8746_188_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83139609C>T COSN15432024 AOCS-150-8-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3171 aATACATCTgttttt AGAUGUAU m8a (m8a->m7a) HHFCT_60237_cluster-8746_187_8
hsa-miR-5683 aataCATCTGTtttt UACAGAUG m7b Disrupted HHFCT_60237_cluster-8746_187_8
hsa-miR-7-1-3p aatacATTTGTTttt CAACAAAU m7b Created HHFCT_60237_cluster-8746_187_8
hsa-miR-7-2-3p aatacATTTGTTttt CAACAAAU m7b Created HHFCT_60237_cluster-8746_187_8
hsa-miR-3171 aATACATCTgttttt AGAUGUAU m8a (m8a->m7a) HHFCT_60237_cluster-8746_187_8
hsa-miR-5683 aataCATCTGTtttt UACAGAUG m7b Disrupted HHFCT_60237_cluster-8746_187_8
hsa-miR-7-1-3p aatacATTTGTTttt CAACAAAU m7b Created HHFCT_60237_cluster-8746_187_8
hsa-miR-7-2-3p aatacATTTGTTttt CAACAAAU m7b Created HHFCT_60237_cluster-8746_187_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83110433C>T COSN15308685 LP6007404-DNA_A01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3692-3p tgcaaTGTGGAAgag GUUCCACA m7b Created HHFCT_60234_cluster-8746_184_8
hsa-miR-718 tgcaatGCGGAAGag CUUCCGCC m7a Disrupted HHFCT_60234_cluster-8746_184_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83047541A>G COSN9653877 C0031T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-3p aagacCTGAAAactg CUUUCAGU m6b Created HHFCT_60225_cluster-8746_175_8
hsa-miR-30d-3p aagacCTGAAAactg CUUUCAGU m6b Created HHFCT_60225_cluster-8746_175_8
hsa-miR-30e-3p aagacCTGAAAactg CUUUCAGU m6b Created HHFCT_60225_cluster-8746_175_8
hsa-miR-6509-5p aagACCTAAaaactg AUUAGGUA m6b Disrupted HHFCT_60225_cluster-8746_175_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.83032089C>T COSM974274 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181c-3p gCGATGGTggcttag AACCAUCG m7b Created HHFKP_57215_cluster-8746_31_9
hsa-miR-6746-3p gcgatGGCGGCTtag CAGCCGCC m7b Disrupted HHFKP_57215_cluster-8746_31_9
hsa-miR-181c-3p gCGATGGTggcttag AACCAUCG m7b Created HHFKP_57215_cluster-8746_31_9
hsa-miR-6746-3p gcgatGGCGGCTtag CAGCCGCC m7b Disrupted HHFKP_57215_cluster-8746_31_9
Mutation Mutation ID Sample Name Cancer Type
chr16:g.83032080C>T COSM4063195 TCGA-BR-4201-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.82939871G>A COSN7275414 8058330 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-424-5p ttttcacGCTGCTGa CAGCAGCA m7a Disrupted HHFKP_57209_cluster-8746_25_8
hsa-miR-4274 ttttcacACTGCTGa CAGCAGUC m7a Created HHFKP_57209_cluster-8746_25_8
hsa-miR-4302 ttttCACACTGctga CCAGUGUG m7b Created HHFKP_57209_cluster-8746_25_8
hsa-miR-4519 ttttcaCACTGCTGa CAGCAGUG m8a Created HHFKP_57209_cluster-8746_25_8
hsa-miR-497-5p ttttcacGCTGCTGa CAGCAGCA m7a Disrupted HHFKP_57209_cluster-8746_25_8
hsa-miR-503-5p ttttcaCGCTGCTga UAGCAGCG m7b Disrupted HHFKP_57209_cluster-8746_25_8
hsa-miR-6499-3p ttttcACACTGCTga AGCAGUGU m8a Created HHFKP_57209_cluster-8746_25_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.82939863G>A COSN7275413 8013222 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3662 ttcgcaCATTTTCac GAAAAUGA m7a Created HHFKP_57209_cluster-8746_25_8
hsa-miR-424-3p ttcgcACGTTTTcac CAAAACGU m7b Disrupted HHFKP_57209_cluster-8746_25_8
hsa-miR-548ad-3p ttcgcaCGTTTTCac GAAAACGA m7a Disrupted HHFKP_57209_cluster-8746_25_8
hsa-miR-570-3p ttcgcacGTTTTCac CGAAAACA m6b Disrupted HHFKP_57209_cluster-8746_25_8
Mutation Mutation ID Sample Name Cancer Type
chr16:g.82939856T>C COSN7275412 8035555 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.82904765C>A COSN6096660 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-298 agccagcCTTCTGCt AGCAGAAG m7b Disrupted HHFCT_60208_cluster-8746_158_8
hsa-miR-5580-5p AGCCAGCAttctgct UGCUGGCU m8a Created HHFCT_60208_cluster-8746_158_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.82902595C>T COSN60618
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1914-3p cccACCCCTCttttc GGAGGGGU m7b Disrupted HHFCT_60207_cluster-8746_157_7
hsa-miR-3154 cccaCCCTTCTtttc CAGAAGGG m7b Created HHFCT_60207_cluster-8746_157_7
hsa-miR-4651 cCCACCCCtcttttc CGGGGUGG m7b Disrupted HHFCT_60207_cluster-8746_157_7
hsa-miR-5194 cccACCCCTCttttc UGAGGGGU m7b Disrupted HHFCT_60207_cluster-8746_157_7
hsa-miR-583 cccaccCCTCTTTtc CAAAGAGG m7b Disrupted HHFCT_60207_cluster-8746_157_7
hsa-miR-608 cCCACCCCTcttttc AGGGGUGG m8a (m8a->m7a) HHFCT_60207_cluster-8746_157_7
hsa-miR-6738-5p cccACCCCTCttttc CGAGGGGU m7b Disrupted HHFCT_60207_cluster-8746_157_7
hsa-miR-6782-5p ccCACCCCTcttttc UAGGGGUG m7b (m7b->m6b) HHFCT_60207_cluster-8746_157_7

Mutation Mutation ID Sample Name Cancer Type
chr16:g.82753426A>G COSN5412928 RK025_C [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-3p gcacACCATTTatcc AAAAUGGU m7b Disrupted HHFCT_60163_cluster-8746_112_8
hsa-miR-4694-3p gcacaCCATTTatcc CAAAUGGA m6b Disrupted HHFCT_60163_cluster-8746_112_8
hsa-miR-522-3p gcacACCATTTatcc AAAAUGGU m7b Disrupted HHFCT_60163_cluster-8746_112_8
hsa-miR-553 gcacACCGTTTatcc AAAACGGU m7b Created HHFCT_60163_cluster-8746_112_8
hsa-miR-224-3p gcacACCATTTatcc AAAAUGGU m7b Disrupted HHFCT_60163_cluster-8746_112_8
hsa-miR-4694-3p gcacaCCATTTatcc CAAAUGGA m6b Disrupted HHFCT_60163_cluster-8746_112_8
hsa-miR-522-3p gcacACCATTTatcc AAAAUGGU m7b Disrupted HHFCT_60163_cluster-8746_112_8
hsa-miR-553 gcacACCGTTTatcc AAAACGGU m7b Created HHFCT_60163_cluster-8746_112_8

Mutation Mutation ID Sample Name Cancer Type
chr16:g.82737209T>C COSN15268711 SM-4B295 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4506 gtcaaACCCATTctg AAAUGGGU m7b Created HHFCT_60159_cluster-8746_108_15
hsa-miR-5087 gtCAAACCCattctg GGGUUUGU m7a (m6a->m7a) HHFCT_60159_cluster-8746_108_15
hsa-miR-6839-3p gtcAAACCCAttctg UUGGGUUU m7b Created HHFCT_60159_cluster-8746_108_15

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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