SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001199215
Gene Symbol: CD200R1L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.112827614T>C COSM1535921 TCGA-44-8119-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3606-3p taaGAAATTTgatca AAAAUUUC m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-513a-3p taaGAAATTTgatca UAAAUUUC m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-513c-3p taaGAAATTTgatca UAAAUUUC m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127

Mutation Mutation ID Sample Name Cancer Type
chr3:g.112827613T>G COSM1036398 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-5p aagaAATGTGAtcat UUCACAUU m7b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-23a-3p aagaAATGTGATcat AUCACAUU m8a Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-23b-3p aagaAATGTGATcat AUCACAUU m8a Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-23c aagaAATGTGATcat AUCACAUU m8a Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-3606-3p aaGAAATTTgatcat AAAAUUUC m7b (m7b->m6b) HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-513a-3p aaGAAATTTgatcat UAAAUUUC m7b (m7b->m6b) HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-513c-3p aaGAAATTTgatcat UAAAUUUC m7b (m7b->m6b) HHRBL_10134_BCBL1-2of3-SCL_9127

Mutation Mutation ID Sample Name Cancer Type
chr3:g.112827580G>T COSM3585422 TCGA-EE-A3J5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3176 cctgagAGGCCAGcc ACUGGCCU m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-3922-3p cctgagAGGCCAGcc UCUGGCCU m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-4642 cctgaGATGCCAgcc AUGGCAUC m7b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-4720-5p cctgagATGCCAGcc CCUGGCAU m7b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-4757-5p cctgAGAGGCCagcc AGGCCUCU m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-4799-3p cctgagATGCCAGcc ACUGGCAU m7b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-5588-5p cctgagATGCCAGcc ACUGGCAU m7b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-6744-3p cctgAGAGGCCagcc GGGCCUCU m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-6878-3p cctgaGAGGCCAGcc CUGGCCUC m8a Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127

Mutation Mutation ID Sample Name Cancer Type
chr3:g.112827570C>T COSM4394935 TCGA-EE-A3JD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-298 cagcctTTCTGCaca AGCAGAAG m6b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-4476 cagCCTTCCTGcaca CAGGAAGG m8a Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-4722-5p cagcctTCCTGCaca GGCAGGAG m6b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-6876-5p cagCCTTCCTGcaca CAGGAAGG m8a Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-873-5p cagccTTCCTGCaca GCAGGAAC m7a Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127

Mutation Mutation ID Sample Name Cancer Type
chr3:g.112827566C>T COSM4112249 TCGA-F1-6177-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p cttcCTGTACAaaag CUGUACAG m7b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-let-7c-3p cttccTGTACAaaag CUGUACAA m6b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-let-7g-3p cttcCTGTACAaaag CUGUACAG m7b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-143-5p cttcCTGCACaaaag GGUGCAGU m6b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-2113 cttcctGCACAAAag AUUUGUGC m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-3944-5p cttcCTGCACAaaag UGUGCAGC m7a Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-493-5p cttccTGTACAAaag UUGUACAU m7a Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-873-5p cTTCCTGCacaaaag GCAGGAAC m7a Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127

Mutation Mutation ID Sample Name Cancer Type
chr3:g.112827551G>A COSM419452 TCGA-BT-A20J-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-578 cctACAAGAAagaaa CUUCUUGU m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-643 ccTACAAGaaagaaa ACUUGUAU m6b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127

Mutation Mutation ID Sample Name Cancer Type
chr3:g.112827543C>T COSM445311 TCGA-A8-A06Q-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4729 aaagaaATAAATGAg UCAUUUAU m8a Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-5696 aaagaaaTAAATGAg CUCAUUUA m7b Created HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-579-3p aaagaaaCAAATGAg UUCAUUUG m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127
hsa-miR-664b-3p aaagaaaCAAATGAg UUCAUUUG m7b Disrupted HHRBL_10134_BCBL1-2of3-SCL_9127

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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