SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_005582
Gene Symbol: CD180
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.67183811C>T COSM3920286 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1249-5p ccaatttTCCCTCCc AGGAGGGA m7b Created HPSD1_7728_G10100.1_66479651
hsa-miR-4668-5p ccaaTTTTCCCTccc AGGGAAAA m8a Created HPSD1_7728_G10100.1_66479651
hsa-miR-5584-5p ccaatTTTCCCTccc CAGGGAAA m7b Created HPSD1_7728_G10100.1_66479651
hsa-miR-6783-5p ccaatTTCCCCTccc UAGGGGAA m7b Disrupted HPSD1_7728_G10100.1_66479651
hsa-miR-6797-5p ccaatttTCCCTCCc AGGAGGGA m7b Created HPSD1_7728_G10100.1_66479651
hsa-miR-1249-5p ccaatttTCCCTCCc AGGAGGGA m7b Created HPSD3_8230_G11073.1_66479651
hsa-miR-4668-5p ccaaTTTTCCCTccc AGGGAAAA m8a Created HPSD3_8230_G11073.1_66479651
hsa-miR-5584-5p ccaatTTTCCCTccc CAGGGAAA m7b Created HPSD3_8230_G11073.1_66479651
hsa-miR-6783-5p ccaatTTCCCCTccc UAGGGGAA m7b Disrupted HPSD3_8230_G11073.1_66479651
hsa-miR-6797-5p ccaatttTCCCTCCc AGGAGGGA m7b Created HPSD3_8230_G11073.1_66479651
hsa-miR-1249-5p ccaatttTCCCTCCc AGGAGGGA m7b Created HPSLB_6043_G7377.1_66479651
hsa-miR-4668-5p ccaaTTTTCCCTccc AGGGAAAA m8a Created HPSLB_6043_G7377.1_66479651
hsa-miR-5584-5p ccaatTTTCCCTccc CAGGGAAA m7b Created HPSLB_6043_G7377.1_66479651
hsa-miR-6783-5p ccaatTTCCCCTccc UAGGGGAA m7b Disrupted HPSLB_6043_G7377.1_66479651
hsa-miR-6797-5p ccaatttTCCCTCCc AGGAGGGA m7b Created HPSLB_6043_G7377.1_66479651

Mutation Mutation ID Sample Name Cancer Type
chr5:g.67183810C>T COSM4457112 CSCC-20-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-149-3p caatttcCCCTCCCt AGGGAGGG m7b Disrupted HPSD1_7728_G10100.1_66479651
hsa-miR-3150b-3p caattTCTCCTCcct UGAGGAGA m7b Created HPSD1_7728_G10100.1_66479651
hsa-miR-4728-5p caatttcCCCTCCCt UGGGAGGG m7b Disrupted HPSD1_7728_G10100.1_66479651
hsa-miR-4784 caattTCTCCTCcct UGAGGAGA m7b Created HPSD1_7728_G10100.1_66479651
hsa-miR-539-5p caATTTCTCCtccct GGAGAAAU m8a Created HPSD1_7728_G10100.1_66479651
hsa-miR-6783-5p caatTTCCCCTccct UAGGGGAA m7b Disrupted HPSD1_7728_G10100.1_66479651
hsa-miR-6785-5p caatttcCCCTCCCt UGGGAGGG m7b Disrupted HPSD1_7728_G10100.1_66479651
hsa-miR-6883-5p caatttcCCCTCCCt AGGGAGGG m7b Disrupted HPSD1_7728_G10100.1_66479651
hsa-miR-7106-5p caatttcTCCTCCCt UGGGAGGA m7b Created HPSD1_7728_G10100.1_66479651
hsa-miR-765 caatttCTCCTCCct UGGAGGAG m7b Created HPSD1_7728_G10100.1_66479651
hsa-miR-149-3p caatttcCCCTCCCt AGGGAGGG m7b Disrupted HPSD3_8230_G11073.1_66479651
hsa-miR-3150b-3p caattTCTCCTCcct UGAGGAGA m7b Created HPSD3_8230_G11073.1_66479651
hsa-miR-4728-5p caatttcCCCTCCCt UGGGAGGG m7b Disrupted HPSD3_8230_G11073.1_66479651
hsa-miR-4784 caattTCTCCTCcct UGAGGAGA m7b Created HPSD3_8230_G11073.1_66479651
hsa-miR-539-5p caATTTCTCCtccct GGAGAAAU m8a Created HPSD3_8230_G11073.1_66479651
hsa-miR-6783-5p caatTTCCCCTccct UAGGGGAA m7b Disrupted HPSD3_8230_G11073.1_66479651
hsa-miR-6785-5p caatttcCCCTCCCt UGGGAGGG m7b Disrupted HPSD3_8230_G11073.1_66479651
hsa-miR-6883-5p caatttcCCCTCCCt AGGGAGGG m7b Disrupted HPSD3_8230_G11073.1_66479651
hsa-miR-7106-5p caatttcTCCTCCCt UGGGAGGA m7b Created HPSD3_8230_G11073.1_66479651
hsa-miR-765 caatttCTCCTCCct UGGAGGAG m7b Created HPSD3_8230_G11073.1_66479651
hsa-miR-149-3p caatttcCCCTCCCt AGGGAGGG m7b Disrupted HPSLB_6043_G7377.1_66479651
hsa-miR-3150b-3p caattTCTCCTCcct UGAGGAGA m7b Created HPSLB_6043_G7377.1_66479651
hsa-miR-4728-5p caatttcCCCTCCCt UGGGAGGG m7b Disrupted HPSLB_6043_G7377.1_66479651
hsa-miR-4784 caattTCTCCTCcct UGAGGAGA m7b Created HPSLB_6043_G7377.1_66479651
hsa-miR-539-5p caATTTCTCCtccct GGAGAAAU m8a Created HPSLB_6043_G7377.1_66479651
hsa-miR-6783-5p caatTTCCCCTccct UAGGGGAA m7b Disrupted HPSLB_6043_G7377.1_66479651
hsa-miR-6785-5p caatttcCCCTCCCt UGGGAGGG m7b Disrupted HPSLB_6043_G7377.1_66479651
hsa-miR-6883-5p caatttcCCCTCCCt AGGGAGGG m7b Disrupted HPSLB_6043_G7377.1_66479651
hsa-miR-7106-5p caatttcTCCTCCCt UGGGAGGA m7b Created HPSLB_6043_G7377.1_66479651
hsa-miR-765 caatttCTCCTCCct UGGAGGAG m7b Created HPSLB_6043_G7377.1_66479651

Mutation Mutation ID Sample Name Cancer Type
chr5:g.67183169C>T COSM3856068 TCGA-HU-A4G8-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273f acatCATCTCacccc GGAGAUGG m6b Disrupted HPSD3_8229_G11072.1_66479016
hsa-miR-143-3p acaTCATCTCAcccc UGAGAUGA m8a Disrupted HPSD3_8229_G11072.1_66479016
hsa-miR-203a-3p acatCATTTCACccc GUGAAAUG m8a Created HPSD3_8229_G11072.1_66479016
hsa-miR-4708-5p acatCATCTCacccc AGAGAUGC m6b Disrupted HPSD3_8229_G11072.1_66479016
hsa-miR-4770 acaTCATCTCAcccc UGAGAUGA m8a Disrupted HPSD3_8229_G11072.1_66479016
hsa-miR-6088 acaTCATCTCacccc AGAGAUGA m7b Disrupted HPSD3_8229_G11072.1_66479016

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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