SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001238
Gene Symbol: CCNE1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.29817503C>T COSM4076583 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-509-3-5p tCTGCAGTcaaaaat UACUGCAG m7b Created HPRO6_37839_G44836.1_30308413
hsa-miR-943 tctgCAGTCAaaaat CUGACUGU m6b Created HPRO6_37839_G44836.1_30308413
hsa-miR-6842-3p tctgCAGCCAAaaat UUGGCUGG m7a Disrupted HPRO6_37839_G44836.1_30308413
hsa-miR-6762-3p tctGCAGCCAaaaat UGGCUGCU m7a Disrupted HPRO6_37839_G44836.1_30308413
hsa-miR-647 tctGCAGCCAaaaat GUGGCUGC m7b Disrupted HPRO6_37839_G44836.1_30308413
hsa-miR-604 tctGCAGCCaaaaat AGGCUGCG m6b Disrupted HPRO6_37839_G44836.1_30308413
hsa-miR-509-5p tCTGCAGTcaaaaat UACUGCAG m7b Created HPRO6_37839_G44836.1_30308413
hsa-miR-5002-3p tctGCAGTCAaaaat UGACUGCC m7a Created HPRO6_37839_G44836.1_30308413
hsa-miR-4439 tctgCAGTCAaaaat GUGACUGA m6b Created HPRO6_37839_G44836.1_30308413
hsa-miR-3136-5p tctgCAGTCAaaaat CUGACUGA m6b Created HPRO6_37839_G44836.1_30308413

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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