SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0010035
Gene Symbol: CASP9
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.15518205C>A COSM1335287 TCGA-AA-3496-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255b-2-3p cttacccAAGTGGTg AACCACUU m7b Created HHFKP_613_cluster-1283_5_279
hsa-miR-3614-5p cttacCCAAGTGGtg CCACUUGG m8a Created HHFKP_613_cluster-1283_5_279
hsa-miR-6881-5p cTTACCCCAgtggtg UGGGGUAA m8a (m8a->m7a) HHFKP_613_cluster-1283_5_279
hsa-miR-7155-5p cttACCCCAGtggtg UCUGGGGU m7b Disrupted HHFKP_613_cluster-1283_5_279

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15518203G>T COSM3399841 TCGA-32-4210-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6890-5p tACCCCATtggtgct CAUGGGGU m7b Created HHFKP_613_cluster-1283_5_279

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15518191C>T COSM1335286 TCGA-CM-6170-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146a-3p gctcagaTCAGAGat CCUCUGAA m6b Created HHFKP_613_cluster-1283_5_279
hsa-miR-301a-5p gctcagaTCAGAGat GCUCUGAC m6b Created HHFKP_613_cluster-1283_5_279
hsa-miR-301b-5p gctcagaTCAGAGat GCUCUGAC m6b Created HHFKP_613_cluster-1283_5_279
hsa-miR-3151-3p gctcaGATCAGagat CCUGAUCC m6b Created HHFKP_613_cluster-1283_5_279
hsa-miR-3191-5p gctcagaCCAGAGAt CUCUCUGG m7b Disrupted HHFKP_613_cluster-1283_5_279
hsa-miR-3192-3p gctcaGATCAGAGat CUCUGAUC m8a Created HHFKP_613_cluster-1283_5_279
hsa-miR-3200-5p gCTCAGATcagagat AAUCUGAG m7b Created HHFKP_613_cluster-1283_5_279
hsa-miR-326 gctcagaCCAGAGat CCUCUGGG m6b Disrupted HHFKP_613_cluster-1283_5_279
hsa-miR-3663-5p gctcAGACCAGagat GCUGGUCU m7b Disrupted HHFKP_613_cluster-1283_5_279
hsa-miR-6503-5p gctCAGACCagagat AGGUCUGC m6b Disrupted HHFKP_613_cluster-1283_5_279
hsa-miR-6764-3p gctcagACCAGAGAt UCUCUGGU m8a Disrupted HHFKP_613_cluster-1283_5_279
hsa-miR-6824-3p gctcagACCAGAGAt UCUCUGGU m8a Disrupted HHFKP_613_cluster-1283_5_279

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15518167C>A COSM3705134 HCC168T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3161 agaggTTATCAGacc CUGAUAAG m7a Created HHFCT_660_cluster-1283_1_5220
hsa-miR-4251 agaggTTCTCAGacc CCUGAGAA m7b Disrupted HHFCT_660_cluster-1283_1_5220
hsa-miR-4329 agaggtTCTCAGacc CCUGAGAC m6b Disrupted HHFCT_660_cluster-1283_1_5220
hsa-miR-589-5p agaGGTTCTCAgacc UGAGAACC m8a Disrupted HHFCT_660_cluster-1283_1_5220

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15518155A>C COSM1687037 YUAKER [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1293 accggaACCACCCAg UGGGUGGU m8a Created HHFCT_660_cluster-1283_1_5220
hsa-miR-203a-5p accgGAACCACccag AGUGGUUC m7b Created HHFCT_660_cluster-1283_1_5220
hsa-miR-218-1-3p accGGAACCAcccag AUGGUUCC m7b Created HHFCT_660_cluster-1283_1_5220
hsa-miR-363-5p accggaaCCACCCag CGGGUGGA m6b Created HHFCT_660_cluster-1283_1_5220
hsa-miR-4455 accggaaACACCCag AGGGUGUG m6b Disrupted HHFCT_660_cluster-1283_1_5220
hsa-miR-4483 accggaACCACCCag GGGGUGGU m7b Created HHFCT_660_cluster-1283_1_5220
hsa-miR-609 accggaAACACCCag AGGGUGUU m7b Disrupted HHFCT_660_cluster-1283_1_5220
hsa-miR-6756-5p accggaaCCACCCag AGGGUGGG m6b Created HHFCT_660_cluster-1283_1_5220
hsa-miR-6766-5p accggaaCCACCCag CGGGUGGG m6b Created HHFCT_660_cluster-1283_1_5220
hsa-miR-876-3p accggAACCACCcag UGGUGGUU m7b Created HHFCT_660_cluster-1283_1_5220
hsa-miR-1293 accggaACCACCCAg UGGGUGGU m8a Created HHFKP_612_cluster-1283_4_25
hsa-miR-203a-5p accgGAACCACccag AGUGGUUC m7b Created HHFKP_612_cluster-1283_4_25
hsa-miR-218-1-3p accGGAACCAcccag AUGGUUCC m7b Created HHFKP_612_cluster-1283_4_25
hsa-miR-363-5p accggaaCCACCCag CGGGUGGA m6b Created HHFKP_612_cluster-1283_4_25
hsa-miR-4455 accggaaACACCCag AGGGUGUG m6b Disrupted HHFKP_612_cluster-1283_4_25
hsa-miR-4483 accggaACCACCCag GGGGUGGU m7b Created HHFKP_612_cluster-1283_4_25
hsa-miR-609 accggaAACACCCag AGGGUGUU m7b Disrupted HHFKP_612_cluster-1283_4_25
hsa-miR-6756-5p accggaaCCACCCag AGGGUGGG m6b Created HHFKP_612_cluster-1283_4_25
hsa-miR-6766-5p accggaaCCACCCag CGGGUGGG m6b Created HHFKP_612_cluster-1283_4_25
hsa-miR-876-3p accggAACCACCcag UGGUGGUU m7b Created HHFKP_612_cluster-1283_4_25

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15518130C>T COSM3984356 TCGA-HE-7130-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-519d-5p attggtTTTGGAGGa CCUCCAAA m8a Created HHFKP_612_cluster-1283_4_25
hsa-miR-548aa atTGGTTTTggagga AAAAACCA m7b (m6b->m7b) HHFKP_612_cluster-1283_4_25
hsa-miR-548ap-3p atTGGTTTTggagga AAAAACCA m7b (m6b->m7b) HHFKP_612_cluster-1283_4_25
hsa-miR-548o-3p attgGTTTTGGagga CCAAAACU m7a Created HHFKP_612_cluster-1283_4_25
hsa-miR-548t-3p atTGGTTTTggagga AAAAACCA m7b (m6b->m7b) HHFKP_612_cluster-1283_4_25

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15492972C>T COSM3740732 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1180-3p tttcctCCGGAAAaa UUUCCGGC m7a Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-1203 tttcCTCCGGaaaaa CCCGGAGC m6b Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-3125 tTTCCTCTggaaaaa UAGAGGAA m7b Created HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-3180-5p tttccTCTGGAAaaa CUUCCAGA m7b Created HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-3916 tTTCCTCTggaaaaa AAGAGGAA m7b Created HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-4257 tttCCTCTGGaaaaa CCAGAGGU m7a Created HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-4664-3p tttcctCCGGAAaaa CUUCCGGU m6b Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-520a-5p tttcCTCTGGAaaaa CUCCAGAG m7b Created HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-525-5p tttcCTCTGGAaaaa CUCCAGAG m7b Created HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-6847-5p ttTCCTCTGgaaaaa ACAGAGGA m7b (m6b->m7b) HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-6859-5p tTTCCTCTggaaaaa GAGAGGAA m7b Created HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-766-5p tTTCCTCCggaaaaa AGGAGGAA m7b Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15492963AC>C COSM4669399 T3446 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-561-3p ggaaaAAACTTTtctt CAAAGUUU m7b Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15492958C>T COSM3475939 TCGA-EE-A2MI-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p aacttTTCTTTaaaa CAAAGAAU m6b Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-3133 aacttTTCTTTAaaa UAAAGAAC m7a Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15492958C>A COSM1667166 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p aacttTTCTTTaaaa CAAAGAAU m6b Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-3133 aacttTTCTTTAaaa UAAAGAAC m7a Disrupted HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691
hsa-miR-5692a aacttTTATTTaaaa CAAAUAAU m6b Created HHKTA_47188_NM_001229|1315|1354|1.5143779368115|0.222444105982691

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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