SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_032996
Gene Symbol: CASP9
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.15524118C>T COSM3750476 PTC-46C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6132 tgggacGCCCTGCTg AGCAGGGC m8a Disrupted HHKTB_915_NM_001229|158|197|68.9949528016509|0.222444105982691
hsa-miR-6165 tgggacgTCCTGCTg CAGCAGGA m7b Created HHKTB_915_NM_001229|158|197|68.9949528016509|0.222444105982691
hsa-miR-6510-5p tgggacgCCCTGCTg CAGCAGGG m7b Disrupted HHKTB_915_NM_001229|158|197|68.9949528016509|0.222444105982691
hsa-miR-6836-5p tgggacGCCCTGCtg CGCAGGGC m7b Disrupted HHKTB_915_NM_001229|158|197|68.9949528016509|0.222444105982691
hsa-miR-1286 tgggacGTCCTGCtg UGCAGGAC m7b Created HHKTB_915_NM_001229|158|197|68.9949528016509|0.222444105982691

Mutation Mutation ID Sample Name Cancer Type
chr1:g.15524108C>T COSM3750475 TCGA-G4-6311-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-24-3p tgCTGAGCCgcgagc UGGCUCAG m7b (m7b->m6b) HHKTB_915_NM_001229|158|197|68.9949528016509|0.222444105982691

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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