SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001257118
Gene Symbol: CASP1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029865G>A COSM922446 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1228-5p gcacaCCGCCCAgag GUGGGCGG m7b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-1293 gcacACCACCCAgag UGGGUGGU m8a Created HHFKP_25556_cluster-4572_2_9
hsa-miR-3187-5p gcacaccGCCCAGag CCUGGGCA m6b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-363-5p gcacaCCACCCagag CGGGUGGA m6b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-378g gcacaccGCCCAGag ACUGGGCU m6b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-4483 gcacACCACCCagag GGGGUGGU m7b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-4486 gcacacCGCCCAGag GCUGGGCG m7b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-612 gcacaccGCCCAGag GCUGGGCA m6b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-6736-5p gcacacCACCCAGag CUGGGUGA m7a Created HHFKP_25556_cluster-4572_2_9
hsa-miR-6756-5p gcacaCCACCCagag AGGGUGGG m6b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-6766-5p gcacaCCACCCagag CGGGUGGG m6b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-6776-5p gcacacCACCCAGAg UCUGGGUG m8a Created HHFKP_25556_cluster-4572_2_9
hsa-miR-6860 gcacaccGCCCAGag ACUGGGCA m6b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-6861-5p gcacaccACCCAGag ACUGGGUA m6b Created HHFKP_25556_cluster-4572_2_9

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029863C>T COSM219260 PD3945a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1199-5p acaccGCTCAGagca CCUGAGCC m6b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-1228-5p acaCCGCCCAgagca GUGGGCGG m7b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-301a-5p acaccgcTCAGAGCa GCUCUGAC m7a Created HHFKP_25556_cluster-4572_2_9
hsa-miR-301b-5p acaccgcTCAGAGCa GCUCUGAC m7a Created HHFKP_25556_cluster-4572_2_9
hsa-miR-3187-5p acaccGCCCAGagca CCUGGGCA m6b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-326 acaccgCCCAGAGca CCUCUGGG m7b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-330-5p acaccgCCCAGAGca UCUCUGGG m7b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-378g acaccGCCCAGagca ACUGGGCU m6b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-3921 acaccgCTCAGAGca UCUCUGAG m7b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-4303 acaccGCTCAGAgca UUCUGAGC m7b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-4486 acacCGCCCAGagca GCUGGGCG m7b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-4653-5p acaccgCTCAGAGca UCUCUGAG m7b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-612 acaccGCCCAGagca GCUGGGCA m6b Disrupted HHFKP_25556_cluster-4572_2_9
hsa-miR-6751-3p acaccGCTCAGagca ACUGAGCC m6b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-6860 acaccGCCCAGagca ACUGGGCA m6b Disrupted HHFKP_25556_cluster-4572_2_9

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029852G>T COSM922445 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-202-3p agcacaATACCTCTg AGAGGUAU m8a Created HHFKP_25556_cluster-4572_2_9
hsa-miR-4678 agcacAATACCTctg AAGGUAUU m7b Created HHFKP_25556_cluster-4572_2_9
hsa-miR-5681b agcaCAATACCTctg AGGUAUUG m8a Created HHFKP_25556_cluster-4572_2_9

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029767G>C COSM4017426 TCGA-HF-7136-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1298-3p agtCCCAGATatact CAUCUGGG m7b Disrupted HPCB3_4369_G6043.1_104900482
hsa-miR-204-3p agTCCCAGatatact GCUGGGAA m6b Disrupted HPCB3_4369_G6043.1_104900482
hsa-miR-299-3p agtCCCACATAtact UAUGUGGG m8a Created HPCB3_4369_G6043.1_104900482
hsa-miR-3126-3p agtcCCAGATatact CAUCUGGC m6b Disrupted HPCB3_4369_G6043.1_104900482
hsa-miR-4296 agtCCCACATatact AUGUGGGC m7a Created HPCB3_4369_G6043.1_104900482
hsa-miR-4298 aGTCCCAGatatact CUGGGACA m7a Disrupted HPCB3_4369_G6043.1_104900482
hsa-miR-4314 agTCCCAGAtatact CUCUGGGA m7b (m7b->m6b) HPCB3_4369_G6043.1_104900482
hsa-miR-4491 agtcCCACATatact AAUGUGGA m6b Created HPCB3_4369_G6043.1_104900482
hsa-miR-4646-5p agTCCCAGatatact ACUGGGAA m6b Disrupted HPCB3_4369_G6043.1_104900482
hsa-miR-4648 aGTCCCACAtatact UGUGGGAC m8a (m7a->m8a) HPCB3_4369_G6043.1_104900482
hsa-miR-4657 agtcCCACATatact AAUGUGGA m6b Created HPCB3_4369_G6043.1_104900482
hsa-miR-4769-5p agTCCCACatatact GGUGGGAU m6b Created HPCB3_4369_G6043.1_104900482
hsa-miR-6778-5p agTCCCACatatact AGUGGGAG m6b Created HPCB3_4369_G6043.1_104900482

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029763T>C COSM1660986 ccRCC-93 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-3p ccagatACACTACAa UGUAGUGU m8a Created HPCB1_8085_G10176.1_104900481
hsa-miR-4280 ccagaTACACTacaa GAGUGUAG m6b Created HPCB1_8085_G10176.1_104900481
hsa-miR-6073 ccagataCACTACaa GGUAGUGA m6b Created HPCB1_8085_G10176.1_104900481
hsa-miR-142-3p ccagatACACTACAa UGUAGUGU m8a Created HPCB3_4369_G6043.1_104900482
hsa-miR-4280 ccagaTACACTacaa GAGUGUAG m6b Created HPCB3_4369_G6043.1_104900482
hsa-miR-6073 ccagataCACTACaa GGUAGUGA m6b Created HPCB3_4369_G6043.1_104900482
hsa-miR-142-3p ccagatACACTACAa UGUAGUGU m8a Created HPSEF_4637_G5557.1_104900482
hsa-miR-4280 ccagaTACACTacaa GAGUGUAG m6b Created HPSEF_4637_G5557.1_104900482
hsa-miR-6073 ccagataCACTACaa GGUAGUGA m6b Created HPSEF_4637_G5557.1_104900482

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029756A>C COSM2109175 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-1-3p tactaCAACTCaatg AGAGUUGA m6b Disrupted HPCB1_8085_G10176.1_104900481
hsa-miR-571 tactaCAACTCAatg UGAGUUGG m7a Disrupted HPCB1_8085_G10176.1_104900481
hsa-miR-6134 tactaCACCTCAatg UGAGGUGG m7a Created HPCB1_8085_G10176.1_104900481
hsa-miR-7854-3p tactaCACCTCAatg UGAGGUGA m7a Created HPCB1_8085_G10176.1_104900481
hsa-miR-219a-1-3p tactaCAACTCaatg AGAGUUGA m6b Disrupted HPCB3_4369_G6043.1_104900482
hsa-miR-571 tactaCAACTCAatg UGAGUUGG m7a Disrupted HPCB3_4369_G6043.1_104900482
hsa-miR-6134 tactaCACCTCAatg UGAGGUGG m7a Created HPCB3_4369_G6043.1_104900482
hsa-miR-7854-3p tactaCACCTCAatg UGAGGUGA m7a Created HPCB3_4369_G6043.1_104900482
hsa-miR-219a-1-3p tactaCAACTCaatg AGAGUUGA m6b Disrupted HPSEF_4637_G5557.1_104900482
hsa-miR-571 tactaCAACTCAatg UGAGUUGG m7a Disrupted HPSEF_4637_G5557.1_104900482
hsa-miR-6134 tactaCACCTCAatg UGAGGUGG m7a Created HPSEF_4637_G5557.1_104900482
hsa-miR-7854-3p tactaCACCTCAatg UGAGGUGA m7a Created HPSEF_4637_G5557.1_104900482
Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029744C>A COSM922444 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029148A>G COSM4573993 EWS502 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273c ggattTTGTCGCttt GGCGACAA m7b Created HHFCT_26838_cluster-4572_2_8
hsa-miR-3163 ggATTTTATcgcttt UAUAAAAU m7b (m7b->m6b) HHFCT_26838_cluster-4572_2_8
hsa-miR-8063 gGATTTTGtcgcttt UCAAAAUC m7b Created HHFCT_26838_cluster-4572_2_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029145G>A COSM77418 TCGA-23-1024-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3609 ttttaTCACTTTctg CAAAGUGA m7b Created HHFCT_26838_cluster-4572_2_8
hsa-miR-548ah-5p ttttaTCACTTTctg AAAAGUGA m7b Created HHFCT_26838_cluster-4572_2_8
hsa-miR-3609 ttttaTCACTTTctg CAAAGUGA m7b Created HHFCT_26838_cluster-4572_2_8
hsa-miR-548ah-5p ttttaTCACTTTctg AAAAGUGA m7b Created HHFCT_26838_cluster-4572_2_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029143T>C COSM1350529 TCGA-AH-6549-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-298 ttatcgcCTTCTGCt AGCAGAAG m7b Created HHFCT_26838_cluster-4572_2_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029137C>G COSM1127943 TCGA-CH-5772-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2278 ctttCTGCTCTtcca GAGAGCAG m7b Disrupted HHFCT_26838_cluster-4572_2_8
hsa-miR-4468 cttTCTGCTCTtcca AGAGCAGA m8a Disrupted HHFCT_26838_cluster-4572_2_8
hsa-miR-6077 ctttctgCTCTTCCa GGGAAGAG m7b Disrupted HHFCT_26838_cluster-4572_2_8
hsa-miR-7-5p ctttctgGTCTTCCa UGGAAGAC m7b Created HHFCT_26838_cluster-4572_2_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.105029126C>T COSM365003 LUAD-E00918 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3650 tcCACACCaggtaac AGGUGUGU m6b Disrupted HHFCT_26838_cluster-4572_2_8
hsa-miR-619-3p tccacaCCAGGTaac GACCUGGA m6b Disrupted HHFCT_26838_cluster-4572_2_8
hsa-miR-644a tCCACACTaggtaac AGUGUGGC m7a Created HHFCT_26838_cluster-4572_2_8
hsa-miR-648 tcCACACTaggtaac AAGUGUGC m6b Created HHFCT_26838_cluster-4572_2_8
hsa-miR-7851-3p tccacaCCAGGTAac UACCUGGG m7a Disrupted HHFCT_26838_cluster-4572_2_8
hsa-miR-7978 tccACACCAGgtaac UCUGGUGU m7b Disrupted HHFCT_26838_cluster-4572_2_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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